RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TRPV6Q9H1D0 765 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 MAD2L2Q9UI95 211 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 B4GALT4O60513 344 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 KPNA6O60684 536 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 PURAQ00577 322 aaKnown RBP18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 WTAPQ15007 396 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 STXBP2Q15833 593 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 TMEM240Q5SV17 173 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 ARHGEF16Q5VV41 709 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 COPS5Q92905 334 aa18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 ALDH8A1Q9H2A2 487 aaPredicted RBP18.83■□□□□ 0.6
CLSTN3-204ENST00000535313 PALM3A6NDB9 673 aaPredicted RBP18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 E7EWF7 191 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 ZBTB5O15062 677 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 CFBP00751 764 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 SUPT20HL2P0C7V6 817 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 ACRP10323 421 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 TRAF1Q13077 416 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 GRM4Q14833 912 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 C16orf59Q7L2K0 433 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 IL23AQ9NPF7 189 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 COL20A1Q9P218 1284 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
CLSTN3-204ENST00000535313 A0A0C4DFX4 3053 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 MYH6P13533 1939 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 TMEM265A0A087WTH1 108 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 A6NJR5 290 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 ZNF365Q70YC5 407 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 MAP4K1Q92918 833 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 MTMR8Q96EF0 704 aa18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 CDX2Q99626 313 aaPredicted RBP18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 NOC4LQ9BVI4 516 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 MTIF3Q9H2K0 278 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-204ENST00000535313 ARIH2O95376 493 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 CCL23P55773 120 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 CATIPQ7Z7H3 387 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 TTYH1Q9H313 450 aaPredicted RBP18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 TRMT13Q9NUP7 481 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 MAP3K20Q9NYL2 800 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
CLSTN3-204ENST00000535313 UMODL1Q5DID0 1318 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 EIF3JO75822 258 aaKnown RBP18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 GH1P01241 217 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 DNAJB2P25686 324 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 HSD17B4P51659 736 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 LY6KQ17RY6 165 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 NBPF20Q3BBV1 942 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 RIOX1Q9H6W3 641 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
CLSTN3-204ENST00000535313 PPP1R11O60927 126 aaPredicted RBP18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 FGBP02675 491 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 NR3C2P08235 984 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 TROAPQ12815 778 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 RASIP1Q5U651 963 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 AFG1LQ8WV93 481 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 HERVK_113Q902F9 699 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 TIFAQ96CG3 184 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 PIGSQ96S52 555 aa18.78■□□□□ 0.6
CLSTN3-204ENST00000535313 OPLAHO14841 1288 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 CYP2C9P11712 490 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 GHRHRQ02643 423 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 PTPN11Q06124 597 aaPredicted RBP18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 CASC1Q6TDU7 716 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 MB21D2Q8IYB1 491 aaPredicted RBP18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 WNT8AQ9H1J5 351 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
CLSTN3-204ENST00000535313 SCN10AQ9Y5Y9 1956 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 PNMA6FA0A0J9YX94 578 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 MMP3P08254 477 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 MYCLP12524 364 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 ANTXR2P58335 489 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 ARHGAP1Q07960 439 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 IGDCC4Q8TDY8 1250 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 PDCD2LQ9BRP1 358 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
CLSTN3-204ENST00000535313 GRXCR1A8MXD5 290 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 CYTH3O43739 400 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 FOSL2P15408 326 aa18.75■□□□□ 0.59
CLSTN3-204ENST00000535313 CASTP20810 708 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms