RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 MTA3Q9BTC8 594 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 ANP32EQ9BTT0 268 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 PEG3Q9GZU2 1588 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 PCDH18Q9HCL0 1135 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 CLEC1BQ9P126 229 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 FAN1Q9Y2M0 1017 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 RWDD3Q9Y3V2 267 aa6.12□□□□□ -1.43
ITGB1-219ENST00000534049 SMARCA2P51531 1590 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 ITGAVP06756 1048 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 THBDP07204 575 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 IGFBP6P24592 240 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-219ENST00000534049 ZEB1P37275 1124 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-219ENST00000534049 TTLL10Q6ZVT0 673 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 SP8Q8IXZ3 490 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 ALG3Q92685 438 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 ZNF428Q96B54 188 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 AP5M1Q9H0R1 490 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 IGSF5Q9NSI5 407 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 GULP1Q9UBP9 304 aa6.11□□□□□ -1.43
ITGB1-219ENST00000534049 ZC3H12DA2A288 527 aaKnown RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 IQCA1LA6NCM1 817 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 MEFVO15553 781 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 SASH1O94885 1247 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 SNRPB2P08579 225 aaKnown RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 FBLN1P23142 703 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 ZC3H6P61129 1189 aaKnown RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 TESK1Q15569 626 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 TMEFF1Q8IYR6 380 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 NPLOC4Q8TAT6 608 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 CPA5Q8WXQ8 436 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 PWWP2AQ96N64 755 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 ZCCHC4Q9H5U6 513 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 PARD6AQ9NPB6 346 aa6.1□□□□□ -1.43
ITGB1-219ENST00000534049 BAZ1AQ9NRL2 1556 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-219ENST00000534049 GJB6O95452 261 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 INHBBP09529 407 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 SLC6A11P48066 632 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 MROH9Q5TGP6 573 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 RIOX2Q8IUF8 465 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 LINC01356Q8N9X3 169 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 FRS2Q8WU20 508 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 DIO2Q92813 273 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
ITGB1-219ENST00000534049 TIMM13Q9Y5L4 95 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-219ENST00000534049 B2RBV5 119 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 FUCA1P04066 466 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 ASGR2P07307 311 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 CHRNA2Q15822 529 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 DDR2Q16832 855 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 SLC10A6Q3KNW5 377 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 ANKS3Q6ZW76 656 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 B3GNT8Q7Z7M8 397 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 Q8N1Y9 231 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 MARCH10Q8NA82 808 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-219ENST00000534049 PANK1Q8TE04 598 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 KCNC2Q96PR1 638 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 EPB41L4AQ9HCS5 686 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-219ENST00000534049 LUC7LQ9NQ29 371 aaKnown RBP6.08□□□□□ -1.44
ITGB1-219ENST00000534049 MARCH2Q9P0N8 246 aa6.08□□□□□ -1.44
ITGB1-219ENST00000534049 MROH2BQ7Z745 1585 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 BMP7P18075 431 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 LTBRP36941 435 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 ECI1P42126 302 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 KCNJ6P48051 423 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 NCKAP1LP55160 1127 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 GFRA1P56159 465 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 FOXO4P98177 505 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 MAP4K2Q12851 820 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 MRM1Q6IN84 353 aaKnown RBP6.07□□□□□ -1.44
ITGB1-219ENST00000534049 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-219ENST00000534049 PLEKHO2Q8TD55 490 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-219ENST00000534049 NGRNQ9NPE2 291 aaKnown RBP6.07□□□□□ -1.44
ITGB1-219ENST00000534049 COA3Q9Y2R0 106 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-219ENST00000534049 PMF1-BGLAPU3KQ54 211 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 CUX2O14529 1486 aa6.07□□□□□ -1.44
ITGB1-219ENST00000534049 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
ITGB1-219ENST00000534049 C22orf46C9J442 243 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 NTRK1P04629 796 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 PMLP29590 882 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 CACNB2Q08289 660 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-219ENST00000534049 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 ERICH6BQ5W0A0 696 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 PPIL6Q8IXY8 311 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 MICAL1Q8TDZ2 1067 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 HNRNPLLQ8WVV9 542 aaKnown RBP6.06□□□□□ -1.44
ITGB1-219ENST00000534049 TMEM169Q96HH4 297 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 TRIM55Q9BYV6 548 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 HCFC2Q9Y5Z7 792 aa6.06□□□□□ -1.44
ITGB1-219ENST00000534049 BAZ1BQ9UIG0 1483 aaKnown RBP6.06□□□□□ -1.44
ITGB1-219ENST00000534049 H7BY64 318 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms