RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
PACS1-213ENST00000533756 CCER1Q8TC90 406 aaPredicted RBP10.85□□□□□ -0.67
PACS1-213ENST00000533756 PPP2R3CQ969Q6 453 aa10.85□□□□□ -0.67
PACS1-213ENST00000533756 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
PACS1-213ENST00000533756 C11orf84Q9BUA3 381 aaPredicted RBP10.85□□□□□ -0.67
PACS1-213ENST00000533756 CLEC1BQ9P126 229 aa10.85□□□□□ -0.67
PACS1-213ENST00000533756 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
PACS1-213ENST00000533756 MCM3APO60318 1980 aa10.85□□□□□ -0.67
PACS1-213ENST00000533756 ZBED4O75132 1171 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 ADRB1P08588 477 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 CYP7A1P22680 504 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 GTF2F1P35269 517 aaKnown RBP eCLIP10.84□□□□□ -0.67
PACS1-213ENST00000533756 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 TMEM63BQ5T3F8 832 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 KIAA1211Q6ZU35 1233 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 MYOCDQ8IZQ8 938 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 CPXCR1Q8N123 301 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 RUBCNQ92622 972 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 YME1L1Q96TA2 773 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 VTA1Q9NP79 307 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 USP24Q9UPU5 2620 aa10.84□□□□□ -0.67
PACS1-213ENST00000533756 MAP1BP46821 2468 aaKnown RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 EP300Q09472 2414 aaPredicted RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 GRM6O15303 877 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 HOXB3P14651 431 aaPredicted RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 MTMR3Q13615 1198 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 TOP1MTQ969P6 601 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 SORCS3Q9UPU3 1222 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 HDAC5Q9UQL6 1122 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
PACS1-213ENST00000533756 CTDP1Q9Y5B0 961 aaPredicted RBP10.83□□□□□ -0.68
PACS1-213ENST00000533756 LGR5O75473 907 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 CKBP12277 381 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
PACS1-213ENST00000533756 BMPR1AP36894 532 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 OAZ1P54368 228 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 TMED8Q6PL24 325 aaPredicted RBP10.82□□□□□ -0.68
PACS1-213ENST00000533756 SESTD1Q86VW0 696 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 CLEC10AQ8IUN9 316 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 FBXO16Q8IX29 292 aaPredicted RBP10.82□□□□□ -0.68
PACS1-213ENST00000533756 MIGA1Q8NAN2 632 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 KREMEN2Q8NCW0 462 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 CYP2W1Q8TAV3 490 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 SUSD6Q92537 303 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 KIF12Q96FN5 646 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 CCDC17Q96LX7 622 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 CTAGE1Q96RT6 745 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 HINFPQ9BQA5 517 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
PACS1-213ENST00000533756 PTPRCP08575 1304 aa10.82□□□□□ -0.68
PACS1-213ENST00000533756 SCN10AQ9Y5Y9 1956 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 ANKRD11Q6UB99 2663 aaPredicted RBP10.81□□□□□ -0.68
PACS1-213ENST00000533756 A6NJR5 290 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 MMP1P03956 469 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 UBTFL1P0CB47 393 aaPredicted RBP10.81□□□□□ -0.68
PACS1-213ENST00000533756 AKR1B1P15121 316 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 CTNNB1P35222 781 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 EEPD1Q7L9B9 569 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 CCDC105Q8IYK2 499 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 FIBCD1Q8N539 461 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 DHX38Q92620 1227 aaKnown RBP10.81□□□□□ -0.68
PACS1-213ENST00000533756 WDR11Q9BZH6 1224 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 MFSD1Q9H3U5 465 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 ACAD9Q9H845 621 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 KANSL2Q9H9L4 492 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 RAD50Q92878 1312 aa10.81□□□□□ -0.68
PACS1-213ENST00000533756 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 DBF4BQ8NFT6 615 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 OR6J1Q8NGC5 347 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 MORC4Q8TE76 937 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 PPP1R13LQ8WUF5 828 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.8□□□□□ -0.68
PACS1-213ENST00000533756 FAM208BQ5VWN6 2430 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 RALGAPA2Q2PPJ7 1873 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 EMSYQ7Z589 1322 aa10.8□□□□□ -0.68
PACS1-213ENST00000533756 RBM47A0AV96 593 aaKnown RBP10.79□□□□□ -0.68
PACS1-213ENST00000533756 NKRFO15226 690 aaKnown RBP eCLIP10.79□□□□□ -0.68
PACS1-213ENST00000533756 RAD21O60216 631 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 BRD1O95696 1058 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 AOC1P19801 751 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 DMWDQ09019 674 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 CAMK1Q14012 370 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 CCDC158Q5M9N0 1113 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 GDF6Q6KF10 455 aaPredicted RBP10.79□□□□□ -0.68
PACS1-213ENST00000533756 DCLK2Q8N568 766 aa10.79□□□□□ -0.68
PACS1-213ENST00000533756 GPR161Q8N6U8 529 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms