RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 SPATA1Q5VX52 437 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 USP49Q70CQ1 688 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 TMC6Q7Z403 805 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 IFNL1Q8IU54 200 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 DPF2Q92785 391 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 DHX58Q96C10 678 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 EPSTI1Q96J88 318 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 CTAGE1Q96RT6 745 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 GMLQ99445 158 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 GLT8D2Q9H1C3 349 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
CHKA-207ENST00000533728 ZMYND8Q9ULU4 1186 aaPredicted RBP10.91□□□□□ -0.66
CHKA-207ENST00000533728 TTF2Q9UNY4 1162 aaKnown RBP10.91□□□□□ -0.66
CHKA-207ENST00000533728 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 A0A087X0B3 334 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 WNT7AO00755 349 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 TTLL1O95922 423 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 PDHBP11177 359 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 FOSL2P15408 326 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 RPS12P25398 132 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 MCM7P33993 719 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 SPAG1Q07617 926 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 TBX2Q13207 712 aaPredicted RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHKA-207ENST00000533728 GPATCH4Q5T3I0 446 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 DTHD1Q6ZMT9 781 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 NYAP1Q6ZVC0 841 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 FILIP1Q7Z7B0 1213 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 CCAR2Q8N163 923 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 CERS5Q8N5B7 392 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 IDI2Q9BXS1 227 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 TMX1Q9H3N1 280 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 FANCLQ9NW38 375 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
CHKA-207ENST00000533728 TPRP12270 2363 aaKnown RBP10.9□□□□□ -0.66
CHKA-207ENST00000533728 WDFY4Q6ZS81 3184 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 A0A1B0GTH6 734 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 RRP9O43818 475 aaKnown RBP10.89□□□□□ -0.67
CHKA-207ENST00000533728 GJB1P08034 283 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 ATP1A3P13637 1013 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 NAPAP54920 295 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 CRHR2Q13324 411 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 IL17AQ16552 155 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 TMEM31Q5JXX7 168 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
CHKA-207ENST00000533728 CDKAL1Q5VV42 579 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 MCTP2Q6DN12 878 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
CHKA-207ENST00000533728 ARMCX5Q6P1M9 558 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 C17orf53Q8N3J3 647 aaPredicted RBP10.89□□□□□ -0.67
CHKA-207ENST00000533728 PDILTQ8N807 584 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
CHKA-207ENST00000533728 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 MKL1Q969V6 931 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 MTMR8Q96EF0 704 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 NAP1L4Q99733 375 aaKnown RBP10.89□□□□□ -0.67
CHKA-207ENST00000533728 DBNDD1Q9H9R9 158 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 DISC1Q9NRI5 854 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 MYO9BQ13459 2157 aa10.89□□□□□ -0.67
CHKA-207ENST00000533728 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 KMT2BQ9UMN6 2715 aaPredicted RBP10.88□□□□□ -0.67
CHKA-207ENST00000533728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
CHKA-207ENST00000533728 GOLGA6L9A6NEM1 432 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 SMCO2A6NFE2 343 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 G3V3G9 751 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 OR52Z1P0C646 297 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 TNNT1P13805 278 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 SHMT1P34896 483 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 CRKP46108 304 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 INHBEP58166 350 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
CHKA-207ENST00000533728 NR1I3Q14994 352 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
CHKA-207ENST00000533728 COBLL1Q53SF7 1204 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 NEK8Q86SG6 692 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 C7orf61Q8IZ16 206 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 NYAP2Q9P242 653 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 RWDD2AQ9UIY3 292 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 SERPINA10Q9UK55 444 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 ATAD5Q96QE3 1844 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms