RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 STAMBPO95630 424 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 ZNF157P51786 506 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 RASA3Q14644 834 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CLUL1Q15846 466 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 HESX1Q9UBX0 185 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 PPP2R3BQ9Y5P8 575 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CACNB3P54284 484 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ARFGAP2Q8N6H7 521 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 JAKMIP2Q96AA8 810 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 MMP19Q99542 508 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 TBC1D22BQ9NU19 505 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ORC4O43929 436 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 XRCC5P13010 732 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 SEL1L2Q5TEA6 688 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ARMCX5Q6P1M9 558 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 RAET1EQ8TD07 263 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 NEK9Q8TD19 979 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 SLC9C1Q4G0N8 1177 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM26FQ5R3K3 315 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM83BQ5T0W9 1011 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.42
AMBRA1-211ENST00000533727 CTAGE9A4FU28 777 aa12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 BTBD18B2RXH4 712 aa12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 NDC80O14777 642 aa12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 ZNF589Q86UQ0 364 aaPredicted RBP12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 ANO3Q9BYT9 981 aa12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.43
AMBRA1-211ENST00000533727 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 DAPK3O43293 454 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 ATP2A2P16615 1042 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 CMA1P23946 247 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 TMEM206Q9H813 350 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 PPLO60437 1756 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 BCORL1Q5H9F3 1711 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 GJC1P36383 396 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 NAA25Q14CX7 972 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 GSTA5Q7RTV2 222 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 KRT76Q01546 638 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 HSP90AA4PQ58FG1 418 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 PPP1R2P3Q6NXS1 205 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 HDXQ7Z353 690 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 CMTR1Q8N1G2 835 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 UBN2Q6ZU65 1347 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 STAT3P40763 770 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 MYOZ2Q9NPC6 264 aa12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 ARMCX3Q9UH62 379 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-211ENST00000533727 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 PTGDRQ13258 359 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 ACCSQ96QU6 501 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 INO80B-WBP1J3KQ70 363 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 VEGFAP15692 232 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 KIF11P52732 1056 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 SCARF1Q14162 830 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 COG2Q14746 738 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 ANGEL2Q5VTE6 544 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 RMDN3Q96TC7 470 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 PSMD14O00487 310 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 KRT9P35527 623 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 HUNKP57058 714 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 SARNPP82979 210 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 MED10Q9BTT4 135 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms