RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SH3RF3Q8TEJ3 882 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PARD3BQ8TEW8 1205 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 JAKMIP2Q96AA8 810 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CSRNP1Q96S65 589 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 HAUS4Q9H6D7 363 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CABP5Q9NP86 173 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 RCOR1Q9UKL0 485 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 VIRMAQ69YN4 1812 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 SHPRHQ149N8 1683 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PHRF1Q9P1Y6 1649 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 FSBPO95073 299 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TRIM21P19474 475 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TPP2P29144 1249 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TRIM14Q14142 442 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 PTPN21Q16825 1174 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 SDCCAG8Q86SQ7 713 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 UBLCP1Q8WVY7 318 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC43Q96MW1 224 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TTC14Q96N46 770 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 COA1Q9GZY4 146 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 HPCAL4Q9UM19 191 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TLDC2A0PJX2 215 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 FGAP02671 866 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 XBP1P17861 261 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 ABCD1P33897 745 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 USP14P54578 494 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 NLRP5P59047 1200 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TNNC1P63316 161 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 TNIP1Q15025 636 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 MSANTD4Q8NCY6 345 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 PI4K2BQ8TCG2 481 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 HVCN1Q96D96 273 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 PNKPQ96T60 521 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 LLPHQ9BRT6 129 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 EPN3Q9H201 632 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 KCND1Q9NSA2 647 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 DIAPH2O60879 1101 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 PPP1R37O75864 691 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 EPS15P42566 896 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 CRKP46108 304 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 PDE4BQ07343 736 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 SEPT2Q15019 361 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 ARHGAP22Q7Z5H3 698 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 ZNF473Q8WTR7 871 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 KLHL29Q96CT2 875 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 STMN4Q9H169 189 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 GPHNQ9NQX3 736 aaPredicted RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 ABT1Q9ULW3 272 aaKnown RBP7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 GLI3P10071 1580 aa7.47□□□□□ -1.21
TGFBR3-209ENST00000532540 STXBP3O00186 592 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 NDUFA8P51970 172 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 EMBQ6PCB8 327 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 INTS8Q75QN2 995 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 TRIM74Q86UV6 250 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 TRIM73Q86UV7 250 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 MFN1Q8IWA4 741 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 CPXCR1Q8N123 301 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC42Q96M95 316 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 CCT8L2Q96SF2 557 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 RMI1Q9H9A7 625 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 GPBP1L1Q9HC44 474 aaPredicted RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 GPCPD1Q9NPB8 672 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 LARSQ9P2J5 1176 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 PAIP2BQ9ULR5 123 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 PCDHA7Q9UN72 937 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 USH1CQ9Y6N9 552 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 NHSL1Q5SYE7 1610 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 A0A1W2PQ27 194 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 A0A1W2PQ64 194 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 A0A1W2PQD8 194 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 SOWAHDA6NJG2 315 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 SMIM22K7EJ46 135 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 ENC1O14682 589 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 DNAJC8O75937 253 aaPredicted RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 GOLGA8HP0CJ92 632 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 GNAT1P11488 350 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 RPS6KA3P51812 740 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 GUCY2FP51841 1108 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 MRPL12P52815 198 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 KRT71Q3SY84 523 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 SLC10A5Q5PT55 438 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 C6orf163Q5TEZ5 329 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 PODNQ7Z5L7 613 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 SPATA24Q86W54 205 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 LRRC47Q8N1G4 583 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 KAT2BQ92831 832 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 ABTB1Q969K4 478 aaPredicted RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 ZMAT2Q96NC0 199 aaKnown RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 RAB3IPQ96QF0 476 aaPredicted RBP7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 FAM114A2Q9NRY5 505 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms