RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	BCL11A	Q9H165	835 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	MRS2	Q9HD23	443 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	ANGEL1	Q9UNK9	670 aa	Known RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	POLR2A	P24928	1970 aa	Known RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	RIC1	Q4ADV7	1423 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	WNT11	O96014	354 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	PRNP	P04156	253 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	CXCL9	Q07325	125 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	CDK5R2	Q13319	367 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	MTHFSD	Q2M296	383 aa	Known RBP	7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	PPM1J	Q5JR12	505 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	RASIP1	Q5U651	963 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	DIEXF	Q68CQ4	756 aa	Known RBP	7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	VSIG10L	Q86VR7	867 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	TTC5	Q8N0Z6	440 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	SPATA32	Q96LK8	384 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	NOC4L	Q9BVI4	516 aa	Known RBP	7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	BCL2L13	Q9BXK5	485 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	BSDC1	Q9NW68	430 aa	Predicted RBP	7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	NPC1L1	Q9UHC9	1359 aa		7.56	□□□□□ -1.2
PUM1-222	ENST00000531867	DCDC2C	A8MYV0	355 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	SORBS3	O60504	671 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	FAM87A	P0C7U9	286 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	ZNF16	P17020	682 aa	Predicted RBP	7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	GMPS	P49915	693 aa	Predicted RBP	7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	RING1	Q06587	406 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	TAF1C	Q15572	869 aa	Predicted RBP	7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	ZBTB37	Q5TC79	503 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	HDX	Q7Z353	690 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	NIM1K	Q8IY84	436 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	GAL3ST3	Q96A11	431 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	LRRC4C	Q9HCJ2	640 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	RNF19A	Q9NV58	838 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	ZNRF3	Q9ULT6	936 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	ZNF652	Q9Y2D9	606 aa		7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	RBBP6	Q7Z6E9	1792 aa	Known RBP	7.55	□□□□□ -1.2
PUM1-222	ENST00000531867	LIG3	P49916	1009 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	GP2	P55259	537 aa	Known RBP	7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	SF3A1	Q15459	793 aa	Known RBP	7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	MEI1	Q5TIA1	1274 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	AGMO	Q6ZNB7	445 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	USP48	Q86UV5	1035 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	C12orf40	Q86WS4	652 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	IL17RE	Q8NFR9	667 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	CRAMP1	Q96RY5	1269 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	RTFDC1	Q9BY42	306 aa	Predicted RBP	7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	ZNF408	Q9H9D4	720 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	GBA2	Q9HCG7	927 aa	Predicted RBP	7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	NIP7	Q9Y221	180 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	CSAD	Q9Y600	493 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	SNCAIP	Q9Y6H5	919 aa		7.54	□□□□□ -1.2
PUM1-222	ENST00000531867	NTF4	P34130	210 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	DLK2	Q6UY11	383 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	UBXN4	Q92575	508 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	FBXL18	Q96ME1	805 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	FMNL2	Q96PY5	1086 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	DUSP23	Q9BVJ7	150 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	MIR1-1HG	Q9H1L0	117 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	VTI1B	Q9UEU0	232 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	USP16	Q9Y5T5	823 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	ABCC12	Q96J65	1359 aa		7.53	□□□□□ -1.2
PUM1-222	ENST00000531867	CEMIP	Q8WUJ3	1361 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	PPIP5K2	O43314	1243 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	SMARCA5	O60264	1052 aa	Predicted RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	AOC3	Q16853	763 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	LRFN4	Q6PJG9	635 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	CYFIP1	Q7L576	1253 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	ANKRD13A	Q8IZ07	590 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	C2orf69	Q8N8R5	385 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	ZNF507	Q8TCN5	953 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	GIPC2	Q8TF65	315 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	DPF2	Q92785	391 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	PLPPR2	Q96GM1	343 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	PSMG3-AS1	Q96PY0	264 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	MKNK2	Q9HBH9	465 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	CCDC39	Q9UFE4	941 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	CNOT7	Q9UIV1	285 aa	Known RBP	7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	TACC3	Q9Y6A5	838 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	NUP98	P52948	1817 aa		7.52	□□□□□ -1.21
PUM1-222	ENST00000531867	SHTN1	A0MZ66	631 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	PRAMEF27	A3QJZ7	478 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	KCNQ3	O43525	872 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	CTSH	P09668	335 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	KIAA2012	Q0VF49	1180 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	TNIP1	Q15025	636 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	HLF	Q16534	295 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	MAP3K11	Q16584	847 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	STK11IP	Q8N1F8	1099 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	TOP6BL	Q8N6T0	577 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	MISP3	Q96FF7	219 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	FAM161B	Q96MY7	647 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	ATP6V0A2	Q9Y487	856 aa		7.51	□□□□□ -1.21
PUM1-222	ENST00000531867	YDJC	A8MPS7	323 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867		H7C1D1	291 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	HMOX1	P09601	288 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms