RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CACNB2Q08289 660 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAP3K21Q5TCX8 1036 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 EXOC6Q8TAG9 804 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 EDC3Q96F86 508 aaKnown RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 TXNRD2Q9NNW7 524 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 RAPGEFL1Q9UHV5 662 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 DNAH12Q6ZR08 3092 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 EFSO43281 561 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 OIP5O43482 229 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 IFIT2P09913 472 aaKnown RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 CAPN2P17655 700 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 WEE1P30291 646 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 GCLCP48506 637 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 IRX6P78412 446 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 JAG1P78504 1218 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ELOAQ14241 798 aaKnown RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 C1orf229Q6ZS94 237 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 CDX2Q99626 313 aaPredicted RBP8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 LRRCC1Q9C099 1032 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ENAMQ9NRM1 1142 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ALPK3Q96L96 1907 aa8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 CHGBP05060 677 aa8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 LDHCP07864 332 aa8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 TSHZ3Q63HK5 1081 aa8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 FAM109BQ6ICB4 259 aaPredicted RBP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAFAQ8NHW3 353 aaPredicted RBP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 PORCNQ9H237 461 aa8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
TRIM53CP-201ENST00000531490 CDK5RAP2Q96SN8 1893 aa8.46□□□□□ -1.05
TRIM53CP-201ENST00000531490 GOLIM4O00461 696 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 IDH1O75874 414 aaKnown RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 IGHDP01880 384 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 DYNLL1P63167 89 aaKnown RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 LAMC2Q13753 1193 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 C9orf50Q5SZB4 431 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 NAA16Q6N069 864 aaPredicted RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 OTUD7AQ8TE49 926 aaPredicted RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 MYLIPQ8WY64 445 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 SUSD3Q96L08 255 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 SENP6Q9GZR1 1112 aaPredicted RBP8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 MARK1Q9P0L2 795 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 MORF4L1Q9UBU8 362 aa8.46□□□□□ -1.06
TRIM53CP-201ENST00000531490 ATG7O95352 703 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 ATP5JP18859 108 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 CYP7A1P22680 504 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 CAP2P40123 477 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 GSK3AP49840 483 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 IRX3P78415 501 aaPredicted RBP8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 GSTO1P78417 241 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 SHHQ15465 462 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 MAGEB6Q8N7X4 407 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 GOLGA6L1Q8N7Z2 621 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 MIGA1Q8NAN2 632 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 GALNT6Q8NCL4 622 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 GPRC5AQ8NFJ5 357 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 NEDD1Q8NHV4 660 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 TGFBRAP1Q8WUH2 860 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 USP6NLQ92738 828 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 LBHD1Q9BQE6 289 aaPredicted RBP8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 PAGR1Q9BTK6 254 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 TTYH1Q9H313 450 aaPredicted RBP8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 FLRT1Q9NZU1 646 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
TRIM53CP-201ENST00000531490 DOCK3Q8IZD9 2030 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 SHISA8B8ZZ34 492 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 ARAFP10398 606 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 XRCC5P13010 732 aaKnown RBP8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 HERVK_113P62684 666 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 SFSWAPQ12872 951 aaKnown RBP8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 SLC9C2Q5TAH2 1124 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 ANKRD45Q5TZF3 282 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 TEX11Q8IYF3 940 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 KLF15Q9UIH9 416 aa8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 DNMT3AQ9Y6K1 912 aaPredicted RBP8.44□□□□□ -1.06
TRIM53CP-201ENST00000531490 DDX60LQ5H9U9 1706 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms