RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ME1P48163 572 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 COG2Q14746 738 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
CTNND1-228ENST00000531007 FERMT2Q96AC1 680 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 TANGO6Q9C0B7 1094 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-228ENST00000531007 EHMT1Q9H9B1 1298 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-228ENST00000531007 CLIC4Q9Y696 253 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 A0A0G2JLL6 359 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 CUTAO60888 179 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 PPP1R11O60927 126 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 FLOT1O75955 427 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 TOB1P50616 345 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 GHRHRQ02643 423 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 HIC1Q14526 733 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 PTPAQ15257 358 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 KIAA1755Q5JYT7 1200 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 TTC38Q5R3I4 469 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 CATSPERGQ6ZRH7 1159 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 PIK3AP1Q6ZUJ8 805 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 PRRT2Q7Z6L0 340 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 NEK8Q86SG6 692 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 COA7Q96BR5 231 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
CTNND1-228ENST00000531007 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 ADAMTS5Q9UNA0 930 aa11.23□□□□□ -0.61
CTNND1-228ENST00000531007 TOMM70O94826 608 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 CMA1P23946 247 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 COPB2P35606 906 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 PRPHP41219 470 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 USP11P51784 963 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 ATP2C1P98194 919 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-228ENST00000531007 PRKG1Q13976 671 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 LBX2Q6XYB7 198 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 CCDC73Q6ZRK6 1079 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-228ENST00000531007 DDX19AQ9NUU7 478 aaKnown RBP11.22□□□□□ -0.61
CTNND1-228ENST00000531007 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-228ENST00000531007 PCDHA7Q9UN72 937 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
CTNND1-228ENST00000531007 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
CTNND1-228ENST00000531007 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 SPDYE3A6NKU9 549 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-228ENST00000531007 VWA5AO00534 786 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 CEBPZQ03701 1054 aaKnown RBP11.21□□□□□ -0.61
CTNND1-228ENST00000531007 MAP1SQ66K74 1059 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-228ENST00000531007 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-228ENST00000531007 MRPS27Q92552 414 aaKnown RBP11.21□□□□□ -0.61
CTNND1-228ENST00000531007 SLC10A4Q96EP9 437 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 CCDC34Q96HJ3 373 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 ELP3Q9H9T3 547 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 CCPG1Q9ULG6 757 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
CTNND1-228ENST00000531007 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
CTNND1-228ENST00000531007 CTAGE5O15320 804 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 GADD45BO75293 160 aaPredicted RBP11.2□□□□□ -0.62
CTNND1-228ENST00000531007 ZBTB48P10074 688 aaPredicted RBP11.2□□□□□ -0.62
CTNND1-228ENST00000531007 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 USH1GQ495M9 461 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
CTNND1-228ENST00000531007 CCDC183Q5T5S1 534 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
CTNND1-228ENST00000531007 AGTPBP1Q9UPW5 1226 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 PCDHB6Q9Y5E3 794 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 LOC285556D6RIA3 1793 aa11.2□□□□□ -0.62
CTNND1-228ENST00000531007 CYP3A7-CYP3A51PA0A087WV96 503 aa11.19□□□□□ -0.62
CTNND1-228ENST00000531007 MEIS2O14770 477 aa11.19□□□□□ -0.62
CTNND1-228ENST00000531007 IRF6O14896 467 aa11.19□□□□□ -0.62
CTNND1-228ENST00000531007 SLC26A4O43511 780 aa11.19□□□□□ -0.62
CTNND1-228ENST00000531007 RNF40O75150 1001 aa11.19□□□□□ -0.62
CTNND1-228ENST00000531007 CYP3A4P08684 503 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms