RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MARCH2Q9P0N8 246 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQ27 194 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQ64 194 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQC6 194 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQD8 194 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 BIN1O00499 593 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 LTBRP36941 435 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 TESK1Q15569 626 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 TKFCQ3LXA3 575 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 ADGRF1Q5T601 910 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 E4F1Q66K89 784 aaPredicted RBP6.97□□□□□ -1.29
CTR9-204ENST00000529355 SLC7A14Q8TBB6 771 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 INTS4Q96HW7 963 aaKnown RBP6.97□□□□□ -1.29
CTR9-204ENST00000529355 DIRC2Q96SL1 478 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 SIT1Q9Y3P8 196 aa6.97□□□□□ -1.29
CTR9-204ENST00000529355 NPHS1O60500 1241 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 PNLIPP16233 465 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 LONRF2Q1L5Z9 754 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 CEP68Q76N32 757 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 ZSWIM2Q8NEG5 633 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 NLGN2Q8NFZ4 835 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 JAM3Q9BX67 310 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 BCAS3Q9H6U6 928 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 PDLIM7Q9NR12 457 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 FANCLQ9NW38 375 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 TMEM260Q9NX78 707 aa6.96□□□□□ -1.3
CTR9-204ENST00000529355 TIMM13Q9Y5L4 95 aaPredicted RBP6.96□□□□□ -1.3
CTR9-204ENST00000529355 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 ASMTLO95671 621 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 JUNBP17275 347 aaPredicted RBP6.95□□□□□ -1.3
CTR9-204ENST00000529355 PDE6BP35913 854 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
CTR9-204ENST00000529355 KCNAB2Q13303 367 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 SNX17Q15036 470 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 BICRALQ6AI39 1079 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 STYK1Q6J9G0 422 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 FGD2Q7Z6J4 655 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 NOP9Q86U38 636 aaKnown RBP6.95□□□□□ -1.3
CTR9-204ENST00000529355 LZTR1Q8N653 840 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 CHAMP1Q96JM3 812 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 SLC26A8Q96RN1 970 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 TNFRSF12AQ9NP84 129 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 CRTAC1Q9NQ79 661 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 KLHL14Q9P2G3 628 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
CTR9-204ENST00000529355 TRBV23OR9-2A0A075B6M9 112 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.94□□□□□ -1.3
CTR9-204ENST00000529355 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
CTR9-204ENST00000529355 C22orf46C9J442 243 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 NTRK1P04629 796 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 C8AP07357 584 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 MLANAQ16655 118 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 IQCEQ6IPM2 695 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 MPZL3Q6UWV2 235 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 SCLYQ96I15 445 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 GPR27Q9NS67 375 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 PCDHA8Q9Y5H6 950 aa6.94□□□□□ -1.3
CTR9-204ENST00000529355 RASGRP1O95267 797 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 DBHP09172 617 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 GLI4P10075 376 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 ERVFRD-1P60508 538 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
CTR9-204ENST00000529355 OGFOD2Q6N063 350 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 USP33Q8TEY7 942 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
CTR9-204ENST00000529355 NSUN3Q9H649 340 aaKnown RBP6.93□□□□□ -1.3
CTR9-204ENST00000529355 NCOA5Q9HCD5 579 aaKnown RBP6.93□□□□□ -1.3
CTR9-204ENST00000529355 CLDND1Q9NY35 253 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
CTR9-204ENST00000529355 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 LOC105371045A0A1W2PR82 267 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 CRTAMO95727 393 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 LSAMPQ13449 338 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 RAB3GAP1Q15042 981 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 PTPRN2Q92932 1015 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 SGPP1Q9BX95 441 aa6.92□□□□□ -1.3
CTR9-204ENST00000529355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTR9-204ENST00000529355 A0A1W2PQJ5 194 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 LRRC10BA6NIK2 292 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 F8W031 263 aaPredicted RBP6.91□□□□□ -1.3
CTR9-204ENST00000529355 SMARCA5O60264 1052 aaPredicted RBP6.91□□□□□ -1.3
CTR9-204ENST00000529355 COL6A2P12110 1019 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 SDSP20132 328 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 CORO7P57737 925 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 GPR85P60893 370 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 FBLN7Q53RD9 439 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 LCE5AQ5TCM9 118 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
CTR9-204ENST00000529355 GSTCDQ8NEC7 633 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms