RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 EDIL3O43854 480 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 PICALMQ13492 652 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 PRR5LQ6MZQ0 368 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 ZNF662Q6ZS27 426 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 FAM196AQ6ZSG2 479 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 EXOC4Q96A65 974 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 CCDC42Q96M95 316 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 RIOX1Q9H6W3 641 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 PHACTR2O75167 634 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 ZMYND10O75800 440 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 IDEP14735 1019 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 PPP1R2P41236 205 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 VWA3BQ502W6 1294 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 C15orf52Q6ZUT6 534 aaKnown RBP20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 CAGE1Q8TC20 777 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 LARP4BQ92615 738 aaKnown RBP20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 GPCPD1Q9NPB8 672 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 GGA1Q9UJY5 639 aa20.99■□□□□ 0.95
TM9SF1-206ENST00000528669 VPS72Q15906 364 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 UNC13DQ70J99 1090 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 TRERF1Q96PN7 1200 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 A0A1W2PQJ5 194 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 PDE2AO00408 941 aaPredicted RBP20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 TUBBP07437 444 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 IL1R1P14778 569 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 PLCG2P16885 1265 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 SMARCA1P28370 1054 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 ADCY7P51828 1080 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 VAV2P52735 878 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 ATP2B2Q01814 1243 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 KIF5AQ12840 1032 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 LRRC41Q15345 812 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 CCDC96Q2M329 555 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 GLIS3Q8NEA6 775 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 NDST4Q9H3R1 872 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 MMRN2Q9H8L6 949 aa20.98■□□□□ 0.95
TM9SF1-206ENST00000528669 ESYT2A0FGR8 921 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 FIGNQ5HY92 759 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 KCNK18Q7Z418 384 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 SNX29Q8TEQ0 813 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 SECISBP2LQ93073 1101 aaKnown RBP20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 GJA10Q969M2 543 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 ARHGAP20Q9P2F6 1191 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 ATP2B4P23634 1241 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 SPA17Q15506 151 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 UBE2SQ16763 222 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 TMEM266Q2M3C6 531 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 COBLL1Q53SF7 1204 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 CERS3Q8IU89 383 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 DRC1Q96MC2 740 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 GDAP1L1Q96MZ0 367 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 PURBQ96QR8 312 aaKnown RBP20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 SIK3Q9Y2K2 1263 aa20.97■□□□□ 0.95
TM9SF1-206ENST00000528669 AKR1B1P15121 316 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 TNNT3P45378 269 aaPredicted RBP20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 TNNI2P48788 182 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 FXR2P51116 673 aaKnown RBP eCLIP20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 GSPT2Q8IYD1 628 aaKnown RBP20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 HINFPQ9BQA5 517 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 STK17AQ9UEE5 414 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 POLLQ9UGP5 575 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 TAF1LQ8IZX4 1826 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 CKAP4Q07065 602 aaKnown RBP20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 C2orf54Q08AI8 447 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 UIMC1Q96RL1 719 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 MLXIPQ9HAP2 919 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 CAPN6Q9Y6Q1 641 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 MYH10P35580 1976 aa20.96■□□□□ 0.95
TM9SF1-206ENST00000528669 NOVP48745 357 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 CDK17Q00537 523 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 ZSCAN26Q16670 478 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 HSP90B2PQ58FF3 399 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 DPP8Q6V1X1 898 aaPredicted RBP20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 RAD54LQ92698 747 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 DDX12PQ92771 950 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 PSD3Q9NYI0 1048 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 PVALEFA0A1B0GWK0 134 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 F8W031 263 aaPredicted RBP20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 EIF4A3P38919 411 aaKnown RBP20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 ORC2Q13416 577 aaPredicted RBP20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 ECM1Q16610 540 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 MAN2A1Q16706 1144 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 CCDC155Q8N6L0 562 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 IFIH1Q9BYX4 1025 aaKnown RBP20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 PCDHA13Q9Y5I0 950 aa20.95■□□□□ 0.94
TM9SF1-206ENST00000528669 KIF11P52732 1056 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 KRT79Q5XKE5 535 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 RRAGAQ7L523 313 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 GUF1Q8N442 669 aaKnown RBP20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 DEF6Q9H4E7 631 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 DAGLAQ9Y4D2 1042 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 GAKO14976 1311 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 ANO9A1A5B4 782 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 LRRC53A6NM62 1247 aa20.94■□□□□ 0.94
TM9SF1-206ENST00000528669 MOCS3O95396 460 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms