RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CEP68Q76N32 757 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 ZNF605Q86T29 641 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 NOP9Q86U38 636 aaKnown RBP8.58□□□□□ -1.04
PCF11-202ENST00000528336 KISS1RQ969F8 398 aaPredicted RBP8.58□□□□□ -1.04
PCF11-202ENST00000528336 GPR27Q9NS67 375 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 TRAF6Q9Y4K3 522 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 NPFFR2Q9Y5X5 522 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 MRPL42Q9Y6G3 142 aaKnown RBP8.58□□□□□ -1.04
PCF11-202ENST00000528336 ASXL2Q76L83 1435 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 C22orf46C9J442 243 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 FPR2P25090 351 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 ERVFRD-1P60508 538 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 LSAMPQ13449 338 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 RAB3GAP1Q15042 981 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 IRF2BP1Q8IU81 584 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 PLEKHO2Q8TD55 490 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 RXFP1Q9HBX9 757 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 TNFRSF12AQ9NP84 129 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 DCP1AQ9NPI6 582 aaPredicted RBP8.57□□□□□ -1.04
PCF11-202ENST00000528336 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.57□□□□□ -1.04
PCF11-202ENST00000528336 RNF114Q9Y508 228 aa8.57□□□□□ -1.04
PCF11-202ENST00000528336 ESYT3A0FGR9 886 aa8.56□□□□□ -1.04
PCF11-202ENST00000528336 CABP7Q86V35 215 aa8.56□□□□□ -1.04
PCF11-202ENST00000528336 JAZF1Q86VZ6 243 aa8.56□□□□□ -1.04
PCF11-202ENST00000528336 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
PCF11-202ENST00000528336 EPB41L4BQ9H329 900 aa8.56□□□□□ -1.04
PCF11-202ENST00000528336 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
PCF11-202ENST00000528336 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
PCF11-202ENST00000528336 GTF2A2P52657 109 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 GIMAP6Q6P9H5 292 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 RSPO2Q6UXX9 243 aaPredicted RBP8.55□□□□□ -1.04
PCF11-202ENST00000528336 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 PTPRN2Q92932 1015 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 TMEM169Q96HH4 297 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 NDOR1Q9UHB4 597 aa8.55□□□□□ -1.04
PCF11-202ENST00000528336 DBR1Q9UK59 544 aaKnown RBP8.55□□□□□ -1.04
PCF11-202ENST00000528336 ZC3H12DA2A288 527 aaKnown RBP8.54□□□□□ -1.04
PCF11-202ENST00000528336 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
PCF11-202ENST00000528336 PAX4O43316 350 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 NTRK1P04629 796 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 DBHP09172 617 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 GPR85P60893 370 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 GABREP78334 506 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 NLRP10Q86W26 655 aa8.54□□□□□ -1.04
PCF11-202ENST00000528336 ZNF552Q9H707 407 aaPredicted RBP8.54□□□□□ -1.04
PCF11-202ENST00000528336 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
PCF11-202ENST00000528336 CCDC163A0A0D9SF12 145 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 CYBBP04839 570 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 GLI4P10075 376 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 WWC2Q6AWC2 1192 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 PAQR3Q6TCH7 311 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 RPTNQ6XPR3 784 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 LBX2Q6XYB7 198 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 ZFYVE21Q9BQ24 234 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 FANCLQ9NW38 375 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 KLHL14Q9P2G3 628 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 SIT1Q9Y3P8 196 aa8.53□□□□□ -1.04
PCF11-202ENST00000528336 PPP1R12AO14974 1030 aaPredicted RBP8.52□□□□□ -1.05
PCF11-202ENST00000528336 ASMTLO95671 621 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 CBX2Q14781 532 aaPredicted RBP8.52□□□□□ -1.05
PCF11-202ENST00000528336 NR1I3Q14994 352 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 MAMDC2Q7Z304 686 aaPredicted RBP8.52□□□□□ -1.05
PCF11-202ENST00000528336 JAM3Q9BX67 310 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 TMEM260Q9NX78 707 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 PCDHA9Q9Y5H5 950 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 PCDHA8Q9Y5H6 950 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 HCFC2Q9Y5Z7 792 aa8.52□□□□□ -1.05
PCF11-202ENST00000528336 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 AQP7O14520 342 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 RAPGEF3O95398 923 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 VIPR1P32241 457 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 GUCY1A3Q02108 690 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 MTDHQ86UE4 582 aaKnown RBP8.51□□□□□ -1.05
PCF11-202ENST00000528336 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.51□□□□□ -1.05
PCF11-202ENST00000528336 SLC7A14Q8TBB6 771 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 KCNJ15Q99712 375 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 SLC52A2Q9HAB3 445 aa8.51□□□□□ -1.05
PCF11-202ENST00000528336 COA3Q9Y2R0 106 aaPredicted RBP8.51□□□□□ -1.05
PCF11-202ENST00000528336 TLDC2A0PJX2 215 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 H7BY64 318 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 ABLIM1O14639 778 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
PCF11-202ENST00000528336 SRSF3P84103 164 aaKnown RBP8.5□□□□□ -1.05
PCF11-202ENST00000528336 PRR5P85299 388 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
PCF11-202ENST00000528336 TMEM62Q0P6H9 643 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 KIZQ2M2Z5 673 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 TMC6Q7Z403 805 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 HOMER1Q86YM7 354 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 APPBP2Q92624 585 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 NCOA5Q9HCD5 579 aaKnown RBP8.5□□□□□ -1.05
PCF11-202ENST00000528336 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 TBX22Q9Y458 520 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 X6R8D5 127 aa8.5□□□□□ -1.05
PCF11-202ENST00000528336 MYOCOSA0A1B0GUC4 107 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms