RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 IFNAR2P48551 515 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 TCIRG1Q13488 830 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 BIRC3Q13489 604 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 GRIPAP1Q4V328 841 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 PIK3AP1Q6ZUJ8 805 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 CWC25Q9NXE8 425 aaPredicted RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 ZNF532Q9HCE3 1301 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 EVI5O60447 810 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 KIF5BP33176 963 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 LIFRP42702 1097 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 ICA1Q05084 483 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 ARHGAP20Q9P2F6 1191 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 FBXL5Q9UKA1 691 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 DCDC2CA8MYV0 355 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 PALMO75781 387 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 SLC1A4P43007 532 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 FOXO4P98177 505 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 ZNF844Q08AG5 666 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 FAM114A1Q8IWE2 563 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 ADSSL1Q8N142 457 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 CCHCR1Q8TD31 782 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 MRC1P22897 1456 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 TAF11Q15544 211 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 LACTB2Q53H82 288 aaPredicted RBP13.75□□□□□ -0.21
TSKU-203ENST00000527881 C3orf20Q8ND61 904 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 PRCCQ92733 491 aaPredicted RBP13.75□□□□□ -0.21
TSKU-203ENST00000527881 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 TSKSQ9UJT2 592 aa13.75□□□□□ -0.21
TSKU-203ENST00000527881 KCNK3O14649 394 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 CEP104O60308 925 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 METTL24Q5JXM2 366 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 MIS18BP1Q6P0N0 1132 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 MREGQ8N565 214 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 MTRQ99707 1265 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 SALL4Q9UJQ4 1053 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 PECAM1P16284 738 aaPredicted RBP13.74□□□□□ -0.21
TSKU-203ENST00000527881 MXRA7P84157 204 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
TSKU-203ENST00000527881 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 OSBPL1AQ9BXW6 950 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 KRT23Q9C075 422 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
TSKU-203ENST00000527881 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
TSKU-203ENST00000527881 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
TSKU-203ENST00000527881 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 MMEP08473 750 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 HSPA9P38646 679 aaKnown RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 UBA7P41226 1012 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 NLRP5P59047 1200 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 TRAF1Q13077 416 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 KIF2BQ8N4N8 673 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 DYDC1Q8WWB3 177 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 ZNF570Q96NI8 536 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 PSMD1Q99460 953 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 DPH5Q9H2P9 285 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 EBF2Q9HAK2 575 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 PCK1P35558 622 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 PDXDC2PQ6P474 469 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 XPO6Q96QU8 1125 aaKnown RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 GOLGA6L10A0A0M3HER8 536 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 ORC4O43929 436 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 SNRPA1P09661 255 aaKnown RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 GHRP10912 638 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 DRD4P21917 467 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 ADD2P35612 726 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 LACTBP83111 547 aaPredicted RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 DHX9Q08211 1270 aaKnown RBP13.73□□□□□ -0.21
TSKU-203ENST00000527881 AKNAD1Q5T1N1 836 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 LRIG3Q6UXM1 1119 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 KLHL29Q96CT2 875 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.73□□□□□ -0.21
TSKU-203ENST00000527881 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
TSKU-203ENST00000527881 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 MBD4O95243 580 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 TATP17735 454 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms