RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 C11orf49Q9H6J7 331 aa10.3□□□□□ -0.76
CCDC90B-208ENST00000527025 ZHX1Q9UKY1 873 aaPredicted RBP10.3□□□□□ -0.76
CCDC90B-208ENST00000527025 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
CCDC90B-208ENST00000527025 PCDHA1Q9Y5I3 950 aa10.3□□□□□ -0.76
CCDC90B-208ENST00000527025 ABCB11O95342 1321 aa10.3□□□□□ -0.76
CCDC90B-208ENST00000527025 PNMA6FA0A0J9YX94 578 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 CCDC69A6NI79 296 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 MSCO60682 206 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 AKR1A1P14550 325 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 EDNRBP24530 442 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 CDC27P30260 824 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 GHRHRQ02643 423 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 APOBRQ0VD83 1088 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 APOA5Q6Q788 366 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 Q6ZUG5 572 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 KLHDC9Q8NEP7 349 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 DPF3Q92784 378 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 FERMT2Q96AC1 680 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 FAM184BQ9ULE4 1060 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 GNEQ9Y223 722 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 SLC12A7Q9Y666 1083 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 SYNRGQ9UMZ2 1314 aa10.29□□□□□ -0.76
CCDC90B-208ENST00000527025 ASB14A6NK59 587 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 DNM1LO00429 736 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 CAPN2P17655 700 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 RPS6KB1P23443 525 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 HSD17B4P51659 736 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 KRT32Q14532 448 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 MICU3Q86XE3 530 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 AGXT2Q9BYV1 514 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
CCDC90B-208ENST00000527025 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.76
CCDC90B-208ENST00000527025 KLF18A0A0U1RQI7 1052 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 DUSP11O75319 330 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 RGS20O76081 388 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 ARIH2O95376 493 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 CFBP00751 764 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 RARBP10826 455 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 NKX3-2P78367 333 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 BEX3Q00994 111 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 TOB2Q14106 344 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 KCNA10Q16322 511 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 BLOC1S2Q6QNY1 142 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 FBXL16Q8N461 479 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 ARRDC4Q8NCT1 418 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 IL31RAQ8NI17 732 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 COPS5Q92905 334 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 BRF1Q92994 677 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 ADD3Q9UEY8 706 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 PNMA2Q9UL42 364 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 PHF24Q9UPV7 400 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 MRPL11Q9Y3B7 192 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
CCDC90B-208ENST00000527025 MEIS2O14770 477 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 ZBTB43O43298 467 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 DTNBO60941 627 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 PPFIA3O75145 1194 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 EIF2AK2P19525 551 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 KIF5BP33176 963 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 EVCP57679 992 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 GJA9P57773 515 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 IQSEC1Q6DN90 963 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 SLC39A5Q6ZMH5 540 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 RUFY3Q7L099 469 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 C7orf61Q8IZ16 206 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 GPKOWQ92917 476 aaPredicted RBP eCLIP10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 RMDN3Q96TC7 470 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 HTATIP2Q9BUP3 242 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 UPF3BQ9BZI7 483 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 BCAS3Q9H6U6 928 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 VTA1Q9NP79 307 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 PXMP2Q9NR77 195 aa10.26□□□□□ -0.77
CCDC90B-208ENST00000527025 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
CCDC90B-208ENST00000527025 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-208ENST00000527025 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms