RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 YEATS2Q9ULM3 1422 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC194A0A1B0GVG4 234 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 HNRNPCL2B2RXH8 293 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 GOLGA8RI6L899 631 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 ZBTB43O43298 467 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 GAS8O95995 478 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 PMS1P54277 932 aaKnown RBP7.13□□□□□ -1.27
CTNND1-212ENST00000525902 AGGF1Q8N302 714 aaeCLIP7.13□□□□□ -1.27
CTNND1-212ENST00000525902 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 DRAXINQ8NBI3 349 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-212ENST00000525902 TMEM60Q9H2L4 133 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 ZSWIM6Q9HCJ5 1215 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 ZCCHC17Q9NP64 241 aaKnown RBP7.13□□□□□ -1.27
CTNND1-212ENST00000525902 ANLNQ9NQW6 1124 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 NLRP2Q9NX02 1062 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 NDE1Q9NXR1 346 aa7.13□□□□□ -1.27
CTNND1-212ENST00000525902 WDR91A4D1P6 747 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 HGSO14964 777 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 SLC27A2O14975 620 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 RTN3O95197 1032 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 RECQLP46063 649 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PDCLQ13371 301 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 NONOQ15233 471 aaKnown RBP eCLIP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KCTD16Q68DU8 428 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 BZW1Q7L1Q6 419 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ANKRD23Q86SG2 305 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 NOP9Q86U38 636 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KCNV2Q8TDN2 545 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 B3GALT6Q96L58 329 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC28BQ9BUN5 200 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 OLFML3Q9NRN5 406 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ZNF839A8K0R7 811 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 IFIT3O14879 490 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC166P0CW27 439 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 HOXA7P31268 230 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 POSTNQ15063 836 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC25Q86WR0 208 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 DDX42Q86XP3 938 aaKnown RBP eCLIP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 LRGUKQ96M69 825 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CRNKL1Q9BZJ0 848 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CD209Q9NNX6 404 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 RABGEF1Q9UJ41 708 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PNMA2Q9UL42 364 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PLXNC1O60486 1568 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ESYT2A0FGR8 921 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 STAM2O75886 525 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PRLP01236 227 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 MARCKSP29966 332 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 DDR1Q08345 913 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PAK1Q13153 545 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 R3HDM1Q15032 1099 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC84Q86UT8 332 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CDR2LQ86X02 465 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 CCDC125Q86Z20 511 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ICA1LQ8NDH6 482 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 TTLL11Q8NHH1 800 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 DBF4Q9UBU7 674 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KDM5AP29375 1690 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KPNA4O00629 521 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 AREL1O15033 823 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 C21orf2O43822 256 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 HSPA1AP0DMV8 641 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 HSPA1BP0DMV9 641 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KRT20P35900 424 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 KCNA1Q09470 495 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 TMEM67Q5HYA8 995 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 LGSNQ5TDP6 509 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ARHGEF25Q86VW2 580 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 TCAIMQ8N3R3 496 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 ATL2Q8NHH9 583 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 NAF1Q96HR8 494 aaKnown RBP7.12□□□□□ -1.27
CTNND1-212ENST00000525902 USP28Q96RU2 1077 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 PLCH2O75038 1416 aa7.12□□□□□ -1.27
CTNND1-212ENST00000525902 SNTNA6NMZ2 147 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 MYO1FO00160 1098 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 PPIP5K2O43314 1243 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 ANP32DO95626 131 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 CPP00450 1065 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 H2AFXP16104 143 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 C4BPBP20851 252 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 DDIT3P35638 169 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 CDR2Q01850 454 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 EIF2B5Q13144 721 aaKnown RBP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 RRS1Q15050 365 aaKnown RBP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 SEL1L2Q5TEA6 688 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 CDH24Q86UP0 819 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 LONP2Q86WA8 852 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 PARD3BQ8TEW8 1205 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 DHX58Q96C10 678 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 NAPBQ9H115 298 aa7.11□□□□□ -1.27
CTNND1-212ENST00000525902 ASCC2Q9H1I8 757 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-212ENST00000525902 ECT2Q9H8V3 914 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms