RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 SPICE1Q8N0Z3 855 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 TRIM58Q8NG06 486 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 IFIH1Q9BYX4 1025 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 PUS7LQ9H0K6 701 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 NOVA2Q9UNW9 492 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 LRRC10BA6NIK2 292 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 STARD3NLO95772 234 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 CYP19A1P11511 503 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 HLFQ16534 295 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 ARFGAP2Q8N6H7 521 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 MRC1P22897 1456 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 C5P01031 1676 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 ADAMTS7Q9UKP4 1686 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 SMIM24O75264 130 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 LGR5O75473 907 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 SLC30A9Q6PML9 568 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 CASKIN2Q8WXE0 1202 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 HYOU1Q9Y4L1 999 aa12.43□□□□□ -0.42
CLNS1A-204ENST00000525428 TRIM37O94972 964 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 CTNNA1P35221 906 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 SPAG1Q07617 926 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 CDC37Q16543 378 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 CAPN11Q9UMQ6 739 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 STK38LQ9Y2H1 464 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 USO1O60763 962 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 MMP1P03956 469 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 LINGO3P0C6S8 592 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 TMBIM4Q9HC24 238 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 NOP53Q9NZM5 478 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 A0A087WZG4 1122 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 A8MUI8 341 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 GNAT1P11488 350 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 PMS1P54277 932 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 KCNJ2P63252 427 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 USP4Q13107 963 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 NTRK3Q16288 839 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 FBXL16Q8N461 479 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 UBLCP1Q8WVY7 318 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 MAGOHBQ96A72 148 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 PAPOLBQ9NRJ5 636 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 SLC12A6Q9UHW9 1150 aa12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 PACSIN2Q9UNF0 486 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-204ENST00000525428 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 EVI5O60447 810 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 DNAJC8O75937 253 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TCP1P17987 556 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 PRCPP42785 496 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 RANBP1P43487 201 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 PTPROQ16827 1216 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TMEM67Q5HYA8 995 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 IRF2BP1Q8IU81 584 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 RPUSD2Q8IZ73 545 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 KIF2BQ8N4N8 673 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 RWDD2AQ9UIY3 292 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 SALL4Q9UJQ4 1053 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 A0A1B0GVG6 124 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 NEFHP12036 1026 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 HSD17B3P37058 310 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 CTCFP49711 727 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ZNF174Q15697 407 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TBC1D25Q3MII6 688 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
CLNS1A-204ENST00000525428 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
CLNS1A-204ENST00000525428 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
CLNS1A-204ENST00000525428 LACTB2Q53H82 288 aaPredicted RBP12.4□□□□□ -0.42
CLNS1A-204ENST00000525428 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
CLNS1A-204ENST00000525428 ALS2CR12Q96Q35 445 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms