RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CXCL17Q6UXB2 119 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 SEPT14Q6ZU15 432 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 MICU3Q86XE3 530 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 RRP36Q96EU6 259 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 LBHD1Q9BQE6 289 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 UBE2OQ9C0C9 1292 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 MAF1Q9H063 256 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 BRPF3Q9ULD4 1205 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
TRAPPC4-205ENST00000525079 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 ARIH2O95376 493 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 CALM1P0DP23 149 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 CALM2P0DP24 149 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 CALM3P0DP25 149 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 TXNP10599 105 aaKnown RBP14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 BMP8BP34820 402 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 HSPA4P34932 840 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 GNAQP50148 359 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 KRT32Q14532 448 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 FCHSD1Q86WN1 690 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 OR6J1Q8NGC5 347 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 ZFP91Q96JP5 570 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 SPZ1Q9BXG8 430 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 PXMP2Q9NR77 195 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 Q9Y3F1 56 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 ELP1O95163 1332 aa14.87□□□□□ -0.03
TRAPPC4-205ENST00000525079 GCOM1H8Y6P7 765 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 REC8O95072 547 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 NR3C2P08235 984 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 CLTBP09497 229 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 POLR2MP0CAP2 368 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 MYCLP12524 364 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 PSMC6P62333 389 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 TRAF1Q13077 416 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 PPP2R5BQ15173 497 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 STXBP2Q15833 593 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 APOA5Q6Q788 366 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 SCFD2Q8WU76 684 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 BADQ92934 168 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 KCNB2Q92953 911 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 IWS1Q96ST2 819 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 LZTS2Q9BRK4 669 aa14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 SEC63Q9UGP8 760 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 NAP1L2Q9ULW6 460 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-205ENST00000525079 A0A0U1RQG5 324 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 KLF18A0A0U1RQI7 1052 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 DCDC2CA8MYV0 355 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 ARVCFO00192 962 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 ZEB2O60315 1214 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 MYL3P08590 195 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 ITGB8P26012 769 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 CDK7P50613 346 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 FGD1P98174 961 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 GHRHRQ02643 423 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 FAAP100Q0VG06 881 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 TMTC3Q6ZXV5 915 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 ANKRD33Q7Z3H0 272 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 PDCD2LQ9BRP1 358 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 TMEM39AQ9NV64 488 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 DNAH12Q6ZR08 3092 aa14.85□□□□□ -0.03
TRAPPC4-205ENST00000525079 ZBTB43O43298 467 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 SLC34A2O95436 690 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 HMGB1P09429 215 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 Q6ZUG5 572 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 IL31RAQ8NI17 732 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 PPP1R13LQ8WUF5 828 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 MAP3K20Q9NYL2 800 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 LTBP2Q14767 1821 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 GRIN2DO15399 1336 aa14.84□□□□□ -0.03
TRAPPC4-205ENST00000525079 GOLGA8AA7E2F4 631 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 GOLGA8BA8MQT2 603 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 SOX1O00570 391 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 SORBS3O60504 671 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 EIF3JO75822 258 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 CABYRO75952 493 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 ITGA7Q13683 1181 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 PGM5Q15124 567 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 RTN1Q16799 776 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 USP17L6PQ6QN14 398 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 TDHQ8IZJ6 230 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 SAMD3Q8N6K7 520 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 SMARCC2Q8TAQ2 1214 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 TOX2Q96NM4 488 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 KIAA1217Q5T5P2 1943 aa14.83□□□□□ -0.04
TRAPPC4-205ENST00000525079 TRIOBPQ9H2D6 2365 aa14.82□□□□□ -0.04
TRAPPC4-205ENST00000525079 A0A1W2PPC1 479 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms