RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ZNF394Q53GI3 561 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 NAALADL2Q58DX5 795 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 SLC10A5Q5PT55 438 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 PERM1Q5SV97 790 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 C17orf99Q6UX52 265 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 PPM1EQ8WY54 764 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 FBXL18Q96ME1 805 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
NEDD8-203ENST00000524927 SMG9Q9H0W8 520 aaKnown RBP9.22□□□□□ -0.93
NEDD8-203ENST00000524927 USP34Q70CQ2 3546 aa9.21□□□□□ -0.93
NEDD8-203ENST00000524927 ERVV-1B6SEH8 477 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 FBXO24O75426 580 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 NTSR2O95665 410 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 MMP14P50281 582 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 GRAPQ13588 217 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 SHHQ15465 462 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 SUSD4Q5VX71 490 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-203ENST00000524927 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 OPTNQ96CV9 577 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 PCDHGB7Q9Y5F8 929 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.94
NEDD8-203ENST00000524927 TCF20Q9UGU0 1960 aaKnown RBP9.21□□□□□ -0.94
NEDD8-203ENST00000524927 PI4K2BG5E9Z4 385 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 ITPKAP23677 461 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 SUPT20HL1Q3ZLR7 823 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 SULT6B1Q6IMI4 303 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 DDX46Q7L014 1031 aaKnown RBP9.2□□□□□ -0.94
NEDD8-203ENST00000524927 ZNF654Q8IZM8 581 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 NOC4LQ9BVI4 516 aaKnown RBP9.2□□□□□ -0.94
NEDD8-203ENST00000524927 ZC3H12CQ9C0D7 883 aaKnown RBP9.2□□□□□ -0.94
NEDD8-203ENST00000524927 CEP44Q9C0F1 390 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEDD8-203ENST00000524927 DEFB129Q9H1M3 183 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 POLLQ9UGP5 575 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 PPP2R3BQ9Y5P8 575 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 USP16Q9Y5T5 823 aa9.2□□□□□ -0.94
NEDD8-203ENST00000524927 PTPRAP18433 802 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 RELL1Q8IUW5 271 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 BSNDQ8WZ55 320 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 LACRTQ9GZZ8 138 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 ACBD3Q9H3P7 528 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 CAPN10Q9HC96 672 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 GPN3Q9UHW5 284 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-203ENST00000524927 DDX41Q9UJV9 622 aaKnown RBP9.19□□□□□ -0.94
NEDD8-203ENST00000524927 NAGPAQ9UK23 515 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 UBN2Q6ZU65 1347 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
NEDD8-203ENST00000524927 DDX60LQ5H9U9 1706 aaKnown RBP9.19□□□□□ -0.94
NEDD8-203ENST00000524927 C5orf42Q9H799 3197 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 C9orf172C9J069 976 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 PFASO15067 1338 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 LILRB5O75023 590 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 USP2O75604 605 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-203ENST00000524927 RGS9O75916 674 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-203ENST00000524927 CETPP11597 493 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 ELNP15502 786 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 PDE3AQ14432 1141 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 KCTD2Q14681 263 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 PPP1R42Q7Z4L9 355 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 LPIN3Q9BQK8 851 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-203ENST00000524927 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 ZNF576Q9H609 170 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 FRRS1LQ9P0K9 344 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 TRIM33Q9UPN9 1127 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 ZFHX4Q86UP3 3567 aa9.18□□□□□ -0.94
NEDD8-203ENST00000524927 H2AFB1P0C5Y9 115 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 H2AFB2P0C5Z0 115 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 COL6A1P12109 1028 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 RACK1P63244 317 aaKnown RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 NRG1Q02297 640 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 RPS26P11Q5JNZ5 115 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 C9orf50Q5SZB4 431 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 GDF6Q6KF10 455 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-203ENST00000524927 TBC1D16Q8TBP0 767 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 CARD11Q9BXL7 1154 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 KBTBD4Q9NVX7 518 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 CPA4Q9UI42 421 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 OGDHLQ9ULD0 1010 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 XIRP2A4UGR9 3374 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 PSME4Q14997 1843 aa9.17□□□□□ -0.94
NEDD8-203ENST00000524927 BTBD19C9JJ37 291 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 F6X3S4 739 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 HYAL3O43820 417 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-203ENST00000524927 IGSF3O75054 1194 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 SASH1O94885 1247 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 RLBP1P12271 317 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 GPTP24298 496 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 TEFQ10587 303 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 PWP1Q13610 501 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 LRRC26Q2I0M4 334 aa9.16□□□□□ -0.94
NEDD8-203ENST00000524927 PARP10Q53GL7 1025 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms