RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 LRRC63Q05C16 580 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 STK4Q13043 487 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 CENPPQ6IPU0 288 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 TBC1D22AQ8WUA7 517 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RUBCNQ92622 972 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RPGRQ92834 1020 aaKnown RBP9.94□□□□□ -0.82
PKP3-202ENST00000524646 CEP95Q96GE4 821 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 CDK5RAP3Q96JB5 506 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 GPR101Q96P66 508 aaPredicted RBP9.94□□□□□ -0.82
PKP3-202ENST00000524646 PNMA5Q96PV4 448 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 MTMR9Q96QG7 549 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 PIGSQ96S52 555 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RAB34Q9BZG1 259 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 RIOX1Q9H6W3 641 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 NHEJ1Q9H9Q4 299 aaPredicted RBP9.94□□□□□ -0.82
PKP3-202ENST00000524646 CD209Q9NNX6 404 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 MED4Q9NPJ6 270 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 BLOC1S4Q9NUP1 217 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 SIK3Q9Y2K2 1263 aa9.94□□□□□ -0.82
PKP3-202ENST00000524646 IGKV6D-41A0A0C4DH26 115 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 MYMKA6NI61 221 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 PDHBP11177 359 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 ADRA2BP18089 450 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 TECP42680 631 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 AARSP49588 968 aaKnown RBP eCLIP9.93□□□□□ -0.82
PKP3-202ENST00000524646 MCM6Q14566 821 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 SPA17Q15506 151 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 CRY2Q49AN0 593 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 VWA3BQ502W6 1294 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 PRR5LQ6MZQ0 368 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 USP17L2Q6R6M4 530 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 LRRC55Q6ZSA7 311 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 SV2BQ7L1I2 683 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 ZNF572Q7Z3I7 529 aaPredicted RBP9.93□□□□□ -0.82
PKP3-202ENST00000524646 GUF1Q8N442 669 aaKnown RBP9.93□□□□□ -0.82
PKP3-202ENST00000524646 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 LARP4BQ92615 738 aaKnown RBP9.93□□□□□ -0.82
PKP3-202ENST00000524646 RAD54LQ92698 747 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 SECISBP2LQ93073 1101 aaKnown RBP9.93□□□□□ -0.82
PKP3-202ENST00000524646 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
PKP3-202ENST00000524646 TSG101Q99816 390 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 LRRC27Q9C0I9 530 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 AGPAT5Q9NUQ2 364 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 TMEM260Q9NX78 707 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 HDAC6Q9UBN7 1215 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 GGA1Q9UJY5 639 aa9.93□□□□□ -0.82
PKP3-202ENST00000524646 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
PKP3-202ENST00000524646 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 PSME4Q14997 1843 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 ENC1O14682 589 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 SLC26A4O43511 780 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 SLC37A4O43826 429 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 TACC1O75410 805 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 LCA5LO95447 670 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 TDP2O95551 362 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 SNHG28P0DPA3 235 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 IDEP14735 1019 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 RFC4P35249 363 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 LMAN1P49257 510 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 KIF11P52732 1056 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 EHHADHQ08426 723 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 KIF5AQ12840 1032 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 SEPT2Q15019 361 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 HSP90B2PQ58FF3 399 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 PDXDC1Q6P996 788 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 PROM2Q8N271 834 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 GOLGA5Q8TBA6 731 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 SNX29Q8TEQ0 813 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 EDEM3Q9BZQ6 932 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 LACRTQ9GZZ8 138 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 RNF216Q9NWF9 866 aaPredicted RBP9.92□□□□□ -0.82
PKP3-202ENST00000524646 VPS18Q9P253 973 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 BIN2Q9UBW5 565 aaPredicted RBP9.92□□□□□ -0.82
PKP3-202ENST00000524646 TFR2Q9UP52 801 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 FAN1Q9Y2M0 1017 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 DAGLAQ9Y4D2 1042 aa9.92□□□□□ -0.82
PKP3-202ENST00000524646 ZNF263O14978 683 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 USO1O60763 962 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 GCFC2P16383 781 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 TXKP42681 527 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 TNNT3P45378 269 aaPredicted RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 TNNI2P48788 182 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 HNRNPH2P55795 449 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 ITIH3Q06033 890 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 GABPAQ06546 454 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 PSMD2Q13200 908 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 KRT79Q5XKE5 535 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms