RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 RINT1Q6NUQ1 792 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 SZRD1Q7Z422 152 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.58
CTSC-203ENST00000524463 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 RIC8AQ9NPQ8 531 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 ZNF18P17022 549 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 RASSF7Q02833 373 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 CEP128Q6ZU80 1094 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 SMC5Q8IY18 1101 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 CFAP36Q96G28 342 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 DSCC1Q9BVC3 393 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 RNF181Q9P0P0 153 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 ITM2BQ9Y287 266 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 ZMYM6O95789 1325 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 ATP5JP18859 108 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 STAT2P52630 851 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 PSMD2Q13200 908 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 AOC3Q16853 763 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 SLC7A3Q8WY07 619 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 WDR62O43379 1518 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 TTLL1O95922 423 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 CTNNA1P35221 906 aaKnown RBP11.45□□□□□ -0.58
CTSC-203ENST00000524463 EPHB1P54762 984 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 CIAPIN1Q6FI81 312 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
CTSC-203ENST00000524463 GCNAQ96QF7 691 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
CTSC-203ENST00000524463 NVLO15381 856 aaKnown RBP11.45□□□□□ -0.58
CTSC-203ENST00000524463 GBP1P32455 592 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 PDCD6IPQ8WUM4 868 aaKnown RBP11.45□□□□□ -0.58
CTSC-203ENST00000524463 VCX3BQ9H321 246 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 RNF8O76064 485 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 CCDC93Q567U6 631 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 ANKRD20A3Q5VUR7 823 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 OR6B2Q6IFH4 312 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 C2orf69Q8N8R5 385 aa11.45□□□□□ -0.58
CTSC-203ENST00000524463 TMEM94Q12767 1356 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
CTSC-203ENST00000524463 ATL3Q6DD88 541 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 DNAAF3Q8N9W5 541 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 HSPH1Q92598 858 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 GNA14O95837 355 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ATF2P15336 505 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
CTSC-203ENST00000524463 USP14P54578 494 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 IQCB1Q15051 598 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ITSN2Q9NZM3 1697 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 FBXW4P57775 412 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ZBTB41Q5SVQ8 909 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 PDZD4Q76G19 769 aaPredicted RBP11.44□□□□□ -0.58
CTSC-203ENST00000524463 SPDL1Q96EA4 605 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 IWS1Q96ST2 819 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 COL4A3BPQ9Y5P4 624 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 HEXIM1O94992 359 aaKnown RBP11.44□□□□□ -0.58
CTSC-203ENST00000524463 MYBP10242 640 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ATICP31939 592 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 ACRBPQ8NEB7 543 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 SCAF8Q9UPN6 1271 aaKnown RBP11.44□□□□□ -0.58
CTSC-203ENST00000524463 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
CTSC-203ENST00000524463 SOX5P35711 763 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 ANGPTL8Q6UXH0 198 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 TESK2Q96S53 571 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
CTSC-203ENST00000524463 NSUN2Q08J23 767 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTSC-203ENST00000524463 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
CTSC-203ENST00000524463 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 ZWILCHQ9H900 591 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 BMP3P12645 472 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 PAK2Q13177 524 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 KRT26Q7Z3Y9 468 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 MED23Q9ULK4 1368 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
CTSC-203ENST00000524463 KRT3P12035 628 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 NDUFA8P51970 172 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 TBCKQ8TEA7 893 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 PARD3Q8TEW0 1356 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 PHBP35232 272 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 PDE1BQ01064 536 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 RCN2Q14257 317 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 SIX6OS1Q8N1H7 587 aa11.43□□□□□ -0.58
CTSC-203ENST00000524463 CALN1Q9BXU9 219 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms