RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 FAM126AQ9BYI3 521 aaPredicted RBP8.22□□□□□ -1.09
SKP1-213ENST00000524288 PLD2O14939 933 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 DLX3O60479 287 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 RAB11FIP3O75154 756 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
SKP1-213ENST00000524288 ECI1P42126 302 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 LINC00310P59036 64 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
SKP1-213ENST00000524288 DLG4P78352 724 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 TM4SF20Q53R12 229 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 CRACR2BQ8N4Y2 399 aaPredicted RBP8.21□□□□□ -1.1
SKP1-213ENST00000524288 UBR7Q8N806 425 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 NDOR1Q9UHB4 597 aa8.21□□□□□ -1.1
SKP1-213ENST00000524288 CCDC163A0A0D9SF12 145 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 FKTNO75072 461 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 ZNF205O95201 554 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 CAPNS1P04632 268 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 SDSP20132 328 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 CNNM4Q6P4Q7 775 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 CRTC3Q6UUV7 619 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 SFMBT1Q9UHJ3 866 aa8.2□□□□□ -1.1
SKP1-213ENST00000524288 STXBP3O00186 592 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 GSNP06396 782 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 CD3EP07766 207 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 C6orf222P0C671 652 aaPredicted RBP8.19□□□□□ -1.1
SKP1-213ENST00000524288 PNLIPP16233 465 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 GFRA1P56159 465 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 RTP1P59025 263 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 ADGRF1Q5T601 910 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 OLFML2BQ68BL8 750 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 TMEM132EQ6IEE7 984 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 GALNT18Q6P9A2 607 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 TMEM145Q8NBT3 493 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 SLC7A14Q8TBB6 771 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 MCMBPQ9BTE3 642 aa8.19□□□□□ -1.1
SKP1-213ENST00000524288 DIS3Q9Y2L1 958 aaKnown RBP8.19□□□□□ -1.1
SKP1-213ENST00000524288 A0A087WZG4 1122 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 A0A087X0B3 334 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
SKP1-213ENST00000524288 FADS2P1A8MWK0 482 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 PDE8AO60658 829 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 CTSKP43235 329 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 AMPD2Q01433 879 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 SCRN1Q12765 414 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
SKP1-213ENST00000524288 USP53Q70EK8 1073 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
SKP1-213ENST00000524288 MRPL4Q9BYD3 311 aaKnown RBP8.18□□□□□ -1.1
SKP1-213ENST00000524288 BRINP2Q9C0B6 783 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 NKX2-4Q9H2Z4 354 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 SLC52A2Q9HAB3 445 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 RAPGEFL1Q9UHV5 662 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 SF3B6Q9Y3B4 125 aaKnown RBP8.18□□□□□ -1.1
SKP1-213ENST00000524288 TAF6LQ9Y6J9 622 aa8.18□□□□□ -1.1
SKP1-213ENST00000524288 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
SKP1-213ENST00000524288 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 ABLIM1O14639 778 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 NUAK1O60285 661 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 EFEMP2O95967 443 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 EVA1CP58658 441 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 NTRK3Q16288 839 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 FGD2Q7Z6J4 655 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 JAMLQ86YT9 394 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 KCTD13Q8WZ19 329 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 TARS2Q9BW92 718 aaKnown RBP8.17□□□□□ -1.1
SKP1-213ENST00000524288 ERVK13-1Q9NX77 482 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 TRAF6Q9Y4K3 522 aa8.17□□□□□ -1.1
SKP1-213ENST00000524288 RFPL3O75679 317 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 IFNGR1P15260 489 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 VAV1P15498 845 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 ARL4AP40617 200 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 ERVFRD-1P60508 538 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 GRB10Q13322 594 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 LAPTM5Q13571 262 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 CT47A1Q5JQC4 288 aaPredicted RBP8.16□□□□□ -1.1
SKP1-213ENST00000524288 CWF19L1Q69YN2 538 aaKnown RBP8.16□□□□□ -1.1
SKP1-213ENST00000524288 CHAC2Q8WUX2 184 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 CDADC1Q9BWV3 514 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 GCM1Q9NP62 436 aa8.16□□□□□ -1.1
SKP1-213ENST00000524288 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
SKP1-213ENST00000524288 VIL1P09327 827 aaKnown RBP8.15□□□□□ -1.1
SKP1-213ENST00000524288 HOXC12P31275 282 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 STAT3P40763 770 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 GALK1P51570 392 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 TMEM62Q0P6H9 643 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 ZNF460Q14592 562 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 HSF5Q4G112 596 aaPredicted RBP8.15□□□□□ -1.1
SKP1-213ENST00000524288 ZPBP2Q6X784 338 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 SLCO6A1Q86UG4 719 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 TRIM39Q9HCM9 518 aa8.15□□□□□ -1.1
SKP1-213ENST00000524288 GPRC5CQ9NQ84 441 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms