RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 UPF3AQ9H1J1 476 aaKnown RBP13.81□□□□□ -0.2
CLN8-207ENST00000524258 VTA1Q9NP79 307 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 PXMP2Q9NR77 195 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
CLN8-207ENST00000524258 MYH6P13533 1939 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 GCOM1H8Y6P7 765 aaPredicted RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 DUSP11O75319 330 aaKnown RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 POLR2MP0CAP2 368 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 SMPD1P17405 629 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 IQSEC1Q6DN90 963 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 USP17L6PQ6QN14 398 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 NSUN6Q8TEA1 469 aaKnown RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
CLN8-207ENST00000524258 FRMPD3Q5JV73 1810 aa13.8□□□□□ -0.2
CLN8-207ENST00000524258 CEP290O15078 2479 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 DNM1LO00429 736 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 PFKFB2O60825 505 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 ARIH2O95376 493 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 LARGE1O95461 756 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 PGK1P00558 417 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 NR3C2P08235 984 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 RARBP10826 455 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 GJA9P57773 515 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 SCRN1Q12765 414 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 GJC2Q5T442 439 aaPredicted RBP13.79□□□□□ -0.2
CLN8-207ENST00000524258 PHKBQ93100 1093 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 BARHL2Q9NY43 387 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
CLN8-207ENST00000524258 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
CLN8-207ENST00000524258 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 CTDNEP1O95476 244 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
CLN8-207ENST00000524258 CST5P28325 142 aaPredicted RBP13.78□□□□□ -0.2
CLN8-207ENST00000524258 NEK4P51957 841 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 MRPS9P82933 396 aaKnown RBP13.78□□□□□ -0.2
CLN8-207ENST00000524258 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 PGM5Q15124 567 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 ME3Q16798 604 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 ARRDC4Q8NCT1 418 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
CLN8-207ENST00000524258 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
CLN8-207ENST00000524258 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 SCG2P13521 617 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 CLK2P49760 499 aaKnown RBP13.77□□□□□ -0.21
CLN8-207ENST00000524258 PDE4DQ08499 809 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 STK3Q13188 491 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 UBE2SQ16763 222 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 PPP1R18Q6NYC8 613 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
CLN8-207ENST00000524258 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 PHF24Q9UPV7 400 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 Q9Y3F1 56 aa13.77□□□□□ -0.21
CLN8-207ENST00000524258 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 DTNBO60941 627 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 EIF3JO75822 258 aaKnown RBP13.76□□□□□ -0.21
CLN8-207ENST00000524258 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 NPY5RQ15761 445 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 STXBP2Q15833 593 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 COPS5Q92905 334 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 TSEN34Q9BSV6 310 aaKnown RBP13.76□□□□□ -0.21
CLN8-207ENST00000524258 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 ZMYND12Q9H0C1 365 aa13.76□□□□□ -0.21
CLN8-207ENST00000524258 B4DLN1 442 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 EDIL3O43854 480 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
CLN8-207ENST00000524258 NAPAP54920 295 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 SNX17Q15036 470 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 KCNA10Q16322 511 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 LRRC26Q2I0M4 334 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 SCFD2Q8WU76 684 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 CRYGNQ8WXF5 182 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
CLN8-207ENST00000524258 TBC1D32Q96NH3 1257 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 AIFM3Q96NN9 605 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
CLN8-207ENST00000524258 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
CLN8-207ENST00000524258 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms