RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 GRID2IPA4D2P6 1211 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 USP17L21D6R901 530 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 M0R2N6 131 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 PLCG1P19174 1290 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 NR1D1P20393 614 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 CXCR5P32302 372 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 GNAQP50148 359 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 DDR1Q08345 913 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 MAN2A1Q16706 1144 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 CABP7Q86V35 215 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 CCDC43Q96MW1 224 aaKnown RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 PPP1R37O75864 691 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 KRT14P02533 472 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 MAP2K2P36507 400 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
SPIDR-225ENST00000524141 CHRNDQ07001 517 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 STK4Q13043 487 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 NUCKS1Q9H1E3 243 aaKnown RBP11.36□□□□□ -0.59
SPIDR-225ENST00000524141 TMEM60Q9H2L4 133 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 FAM207AQ9NSI2 230 aaPredicted RBP11.36□□□□□ -0.59
SPIDR-225ENST00000524141 FLT1P17948 1338 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 FNTAP49354 379 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 DRP2Q13474 957 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 NAA35Q5VZE5 725 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 PSMB7Q99436 277 aa11.36□□□□□ -0.59
SPIDR-225ENST00000524141 TSPY2A6NKD2 308 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 VEGFAP15692 232 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ATP1A2P50993 1020 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 DYNLL1P63167 89 aaKnown RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 RRAGAQ7L523 313 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ARFGAP2Q8N6H7 521 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 EIF1ADQ8N9N8 165 aaKnown RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 PLIN2Q99541 437 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 MMRN2Q9H8L6 949 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 NFU1Q9UMS0 254 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 PCDHA6Q9UN73 950 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 PCDHA8Q9Y5H6 950 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 LAMB2P55268 1798 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 RBAK-RBAKDNI3L0D1 243 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 NMT2O60551 498 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 PTGISQ16647 500 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 INF2Q27J81 1249 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 KLHDC7AQ5VTJ3 777 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 KCTD16Q68DU8 428 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 RASGRP4Q8TDF6 673 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ATP6V1G3Q96LB4 118 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
SPIDR-225ENST00000524141 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 ATP8A2Q9NTI2 1148 aa11.35□□□□□ -0.59
SPIDR-225ENST00000524141 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 GLI1P08151 1106 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 GUCY2DQ02846 1103 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 LRRC63Q05C16 580 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 ASTE1Q2TB18 679 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 SUSD4Q5VX71 490 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 GPATCH11Q8N954 259 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 C3orf20Q8ND61 904 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 ZNF473Q8WTR7 871 aaKnown RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 SLIT2O94813 1529 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 FAM107AO95990 144 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 FCER1AP12319 257 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 MRPS25P82663 173 aaKnown RBP11.34□□□□□ -0.59
SPIDR-225ENST00000524141 FAM47AQ5JRC9 791 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 PDXDC1Q6P996 788 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 FOXR2Q6PJQ5 311 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 KIAA0895Q8NCT3 520 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 EHD2Q9NZN4 543 aa11.34□□□□□ -0.59
SPIDR-225ENST00000524141 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.59
SPIDR-225ENST00000524141 EPHB6O15197 1021 aa11.33□□□□□ -0.59
SPIDR-225ENST00000524141 NCK2O43639 380 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms