RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CD2APQ9Y5K6 639 aa7.23□□□□□ -1.25
SDC2-208ENST00000523877 SYNJ2O15056 1496 aa7.23□□□□□ -1.25
SDC2-208ENST00000523877 SYNDIG1LA6NDD5 238 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 SOWAHBA6NEL2 793 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 TEX28O15482 410 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 MBD4O95243 580 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 OLFM2O95897 454 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 F2P00734 622 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 MX2P20592 715 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PRKAR2BP31323 418 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 SLC16A2P36021 539 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 RFC5P40937 340 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ETV3P41162 512 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 HTR3AP46098 478 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 RXRGP48443 463 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ETV1P50549 477 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PHEXP78562 749 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 FANCCQ00597 558 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ROR2Q01974 943 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 CYP4A11Q02928 519 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 NCBP1Q09161 790 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 PICALMQ13492 652 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PSMD6Q15008 389 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ANKDD1AQ495B1 522 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 SETMARQ53H47 684 aaPredicted RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 NBPF14Q5TI25 921 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PDE12Q6L8Q7 609 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 FAM196AQ6ZSG2 479 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ILDR2Q71H61 639 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 GALNT5Q7Z7M9 940 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 APLFQ8IW19 511 aaPredicted RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 ZFAND2BQ8WV99 257 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 OSBP2Q969R2 916 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ALS2CR12Q96Q35 445 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 C7orf25Q9BPX7 421 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 CLK4Q9HAZ1 481 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 RIMKLBQ9ULI2 386 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 LIMCH1Q9UPQ0 1083 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 PHF24Q9UPV7 400 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 RRP7AQ9Y3A4 280 aaKnown RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 MTF2Q9Y483 593 aaPredicted RBP7.22□□□□□ -1.25
SDC2-208ENST00000523877 ATP6V1DQ9Y5K8 247 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 ABCC10Q5T3U5 1492 aa7.22□□□□□ -1.25
SDC2-208ENST00000523877 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 EME2A4GXA9 379 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 DDX11L8A8MPP1 907 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 A8MVJ9 347 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 E9PMD0 336 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SULT1B1O43704 296 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CSPG5O95196 566 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 EPN2O95208 641 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ITGB1P05556 798 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZFYP08048 801 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 PARP1P09874 1014 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZNF3P17036 446 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 VARSP26640 1264 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 MAPK1P28482 360 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 STAT3P40763 770 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CD86P42081 329 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ST13P50502 369 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 RENBPP51606 427 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 NEK3P51956 506 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 PMS2P54278 862 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CLDN10P78369 228 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 MRPS15P82914 257 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 CD83Q01151 205 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 NFIAQ12857 509 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 DYNC1I2Q13409 638 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 TCIRG1Q13488 830 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SLC14A2Q15849 920 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 GEN1Q17RS7 908 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CCDC57Q2TAC2 916 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 MTERF2Q49AM1 385 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 VWA3BQ502W6 1294 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CCDC38Q502W7 563 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CCDC183Q5T5S1 534 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CWF19L1Q69YN2 538 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 NEK5Q6P3R8 708 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 DBX2Q6ZNG2 339 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 C1orf122Q6ZSJ8 110 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 EEPD1Q7L9B9 569 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ATG9AQ7Z3C6 839 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 LRRTM3Q86VH5 581 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 JAMLQ86YT9 394 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 GRAMD2AQ8IUY3 354 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZSCAN29Q8IWY8 852 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 C7orf61Q8IZ16 206 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SPARTQ8N0X7 666 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 OTUD7AQ8TE49 926 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 NOC3LQ8WTT2 800 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 GIMAP5Q96F15 307 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ASB16Q96NS5 453 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms