RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
PABPC1-222ENST00000523555 MCF2L2Q86YR7 1114 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 RMDN3Q96TC7 470 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 GDF15Q99988 308 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
PABPC1-222ENST00000523555 LOC102724159A0A0B4J2E5 919 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 KLF18A0A0U1RQI7 1052 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 TRIM43BA6NCK2 446 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 MOXD2PA6NHM9 499 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 RGS20O76081 388 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 REC8O95072 547 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 ITGB8P26012 769 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 KIF5BP33176 963 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-222ENST00000523555 TLE2Q04725 743 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 FUT2Q10981 343 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 KRT32Q14532 448 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 PWP2Q15269 919 aaKnown RBP11.02□□□□□ -0.65
PABPC1-222ENST00000523555 LY6KQ17RY6 165 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 DUSP28Q4G0W2 176 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 GNASQ5JWF2 1037 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 CXCL17Q6UXB2 119 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 FCHSD1Q86WN1 690 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 PPP1R13LQ8WUF5 828 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 TRIM43Q96BQ3 446 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-222ENST00000523555 RRP36Q96EU6 259 aaKnown RBP11.02□□□□□ -0.65
PABPC1-222ENST00000523555 PDCD2LQ9BRP1 358 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.65
PABPC1-222ENST00000523555 STARD7Q9NQZ5 370 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 PDLIM7Q9NR12 457 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 GRIN2DO15399 1336 aa11.02□□□□□ -0.65
PABPC1-222ENST00000523555 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 ZBTB43O43298 467 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 PQBP1O60828 265 aaKnown RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 NR3C2P08235 984 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 CALM1P0DP23 149 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 CALM2P0DP24 149 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 CALM3P0DP25 149 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 PSMC6P62333 389 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 PGM5Q15124 567 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 FSCN1Q16658 493 aaKnown RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 C1orf53Q5VUE5 145 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 ARHGEF16Q5VV41 709 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 USP17L6PQ6QN14 398 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 BLOC1S2Q6QNY1 142 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 SEPT14Q6ZU15 432 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 NSUN6Q8TEA1 469 aaKnown RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 BRF1Q92994 677 aa11.01□□□□□ -0.65
PABPC1-222ENST00000523555 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-222ENST00000523555 GOLGA8AA7E2F4 631 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 MEIS2O14770 477 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 PPFIA3O75145 1194 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 SEC24BO95487 1268 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 POLR2MP0CAP2 368 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 TXNP10599 105 aaKnown RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 ADD1P35611 737 aaKnown RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 GNAQP50148 359 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 CDK7P50613 346 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 FXR1P51114 621 aaKnown RBP eCLIP11□□□□□ -0.65
PABPC1-222ENST00000523555 FAAP100Q0VG06 881 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 PPP2R5BQ15173 497 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 UBE2SQ16763 222 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 RTN1Q16799 776 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 GLT1D1Q96MS3 346 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 LZTS2Q9BRK4 669 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 AGXT2Q9BYV1 514 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 MAF1Q9H063 256 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 AP5M1Q9H0R1 490 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 BCAS3Q9H6U6 928 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 SPC25Q9HBM1 224 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 NAP1L2Q9ULW6 460 aaPredicted RBP11□□□□□ -0.65
PABPC1-222ENST00000523555 Q9Y3F1 56 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 SCN5AQ14524 2016 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 FRMPD4Q14CM0 1322 aa11□□□□□ -0.65
PABPC1-222ENST00000523555 SOX1O00570 391 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-222ENST00000523555 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 SORBS3O60504 671 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
PABPC1-222ENST00000523555 MRPS9P82933 396 aaKnown RBP10.99□□□□□ -0.65
PABPC1-222ENST00000523555 ARHGAP1Q07960 439 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 STXBP2Q15833 593 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms