RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	ZNF445	P59923	1031 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	HERVK_113	P62684	666 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	MOXD1	Q6UVY6	613 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	LBX2	Q6XYB7	198 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	RNF207	Q6ZRF8	634 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	RIPK3	Q9Y572	518 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	ZBTB48	P10074	688 aa	Predicted RBP	18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	GHRHR	Q02643	423 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	IL17A	Q16552	155 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	TMEM266	Q2M3C6	531 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	GPAT2	Q6NUI2	795 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	NSMF	Q6X4W1	530 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	CRYGN	Q8WXF5	182 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	SYMPK	Q92797	1274 aa	Known RBP	18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	PNMA3	Q9UL41	463 aa		18.21	■□□□□ 0.51
DENND3-222	ENST00000523530	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	CCL15-CCL14	A0A0B4J2E2	113 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	CTAGE5	O15320	804 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	CYP3A4	P08684	503 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	CYP3A7	P24462	503 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	TXLNA	P40222	546 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	TXK	P42681	527 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	CCL15	Q16663	113 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	SPRYD7	Q5W111	196 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	EPSTI1	Q96J88	318 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	SDF4	Q9BRK5	362 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	PAGR1	Q9BTK6	254 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	ACAD9	Q9H845	621 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	RABGAP1	Q9Y3P9	1069 aa		18.2	■□□□□ 0.5
DENND3-222	ENST00000523530	RPS6	P62753	249 aa	Known RBP	18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	UBXN2A	P68543	259 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	LRSAM1	Q6UWE0	723 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	SLC30A10	Q6XR72	485 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	USP49	Q70CQ1	688 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	TIGD1	Q96MW7	591 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	MTMR9	Q96QG7	549 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	BTBD7	Q9P203	1132 aa		18.19	■□□□□ 0.5
DENND3-222	ENST00000523530	POLR2D	O15514	142 aa	Known RBP	18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	CIITA	P33076	1130 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	TEC	P42680	631 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530		Q4G0T1	1027 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	PRR16	Q569H4	304 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	PDILT	Q8N807	584 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	CHST13	Q8NET6	341 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	MS4A4A	Q96JQ5	239 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	AK8	Q96MA6	479 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	MBOAT7	Q96N66	472 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	RAB34	Q9BZG1	259 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	COL20A1	Q9P218	1284 aa		18.18	■□□□□ 0.5
DENND3-222	ENST00000523530	RIOX2	Q8IUF8	465 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	CKAP2L	Q8IYA6	745 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	CNNM3	Q8NE01	707 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	PANK2	Q9BZ23	570 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	MAF1	Q9H063	256 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	SPATC1L	Q9H0A9	340 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	FBXO40	Q9UH90	709 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	PDHX	O00330	501 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	FXR2	P51116	673 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	ZNF157	P51786	506 aa	Predicted RBP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	BAAT	Q14032	418 aa	Predicted RBP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	POTEE	Q6S8J3	1075 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	SLFN12	Q8IYM2	578 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	RPTOR	Q8N122	1335 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	SMC1B	Q8NDV3	1235 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	RASSF8	Q8NHQ8	419 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	PASK	Q96RG2	1323 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	TAAR1	Q96RJ0	339 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	PYM1	Q9BRP8	204 aa	Known RBP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	TTC12	Q9H892	705 aa	Predicted RBP	18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	SLC45A1	Q9Y2W3	748 aa		18.17	■□□□□ 0.5
DENND3-222	ENST00000523530	BTBD19	C9JJ37	291 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	FAM86B1	E9PN63	330 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	KIF3C	O14782	793 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	PEX10	O60683	326 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	FAM86B2	P0C5J1	330 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	UBA7	P41226	1012 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	LONRF3	Q496Y0	759 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	ARHGEF16	Q5VV41	709 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	KRBA2	Q6ZNG9	492 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	ANKRD23	Q86SG2	305 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	NCAPG2	Q86XI2	1143 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	BRI3BP	Q8WY22	251 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	DHX58	Q96C10	678 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	CCDC34	Q96HJ3	373 aa		18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	HOOK1	Q9UJC3	728 aa	Known RBP	18.16	■□□□□ 0.5
DENND3-222	ENST00000523530	FRMPD4	Q14CM0	1322 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	TBX3	O15119	743 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	CNMD	O75829	334 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	SLC25A27	O95847	323 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	EIF2AK2	P19525	551 aa	Known RBP	18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	COPB2	P35606	906 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	RBM43	Q6ZSC3	357 aa	Known RBP	18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	RASAL3	Q86YV0	1011 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	ANKRD35	Q8N283	1001 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	IGSF22	Q8N9C0	903 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	HAS1	Q92839	578 aa		18.15	■□□□□ 0.5
DENND3-222	ENST00000523530	RMDN3	Q96TC7	470 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms