RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PDE6BP35913 854 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 ADGRF1Q5T601 910 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 BICRALQ6AI39 1079 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 MAMDC2Q7Z304 686 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-206ENST00000523469 PTPRN2Q92932 1015 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 KANSL2Q9H9L4 492 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 PCDHA2Q9Y5H9 948 aa8.76□□□□□ -1.01
CPNE3-206ENST00000523469 MPOP05164 745 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
CPNE3-206ENST00000523469 BCL6P41182 706 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 GPR85P60893 370 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 GABREP78334 506 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 LSAMPQ13449 338 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 KCNT2Q6UVM3 1135 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 CABP7Q86V35 215 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 JAZF1Q86VZ6 243 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 USP33Q8TEY7 942 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 BTG4Q9NY30 223 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPNE3-206ENST00000523469 MARCH2Q9P0N8 246 aa8.75□□□□□ -1.01
CPNE3-206ENST00000523469 MRPL42Q9Y6G3 142 aaKnown RBP8.75□□□□□ -1.01
CPNE3-206ENST00000523469 SRGAP3O43295 1099 aa8.74□□□□□ -1.01
CPNE3-206ENST00000523469 FUCA1P04066 466 aa8.74□□□□□ -1.01
CPNE3-206ENST00000523469 IFNL3Q8IZI9 196 aa8.74□□□□□ -1.01
CPNE3-206ENST00000523469 Q8N1Y9 231 aa8.74□□□□□ -1.01
CPNE3-206ENST00000523469 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
CPNE3-206ENST00000523469 SCRIBQ14160 1630 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 H7BY64 318 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 AQP7O14520 342 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 MSCO60682 206 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 CYBBP04839 570 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 GLI4P10075 376 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 TMEM62Q0P6H9 643 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 NR1I3Q14994 352 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 GIMAP6Q6P9H5 292 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 PAQR3Q6TCH7 311 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 LBX2Q6XYB7 198 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 CEP68Q76N32 757 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 HOMER1Q86YM7 354 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 TEX2Q8IWB9 1127 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE3-206ENST00000523469 TMEM169Q96HH4 297 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 CHAMP1Q96JM3 812 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 TBX22Q9Y458 520 aa8.73□□□□□ -1.01
CPNE3-206ENST00000523469 ESYT3A0FGR9 886 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 C22orf46C9J442 243 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 HRKO00198 91 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 DBHP09172 617 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 SDHBP21912 280 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 CBX2Q14781 532 aaPredicted RBP8.72□□□□□ -1.01
CPNE3-206ENST00000523469 MLANAQ16655 118 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 PRR23BQ6ZRT6 265 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 NLRP10Q86W26 655 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 TRMT2BQ96GJ1 504 aaKnown RBP8.72□□□□□ -1.01
CPNE3-206ENST00000523469 MRPL4Q9BYD3 311 aaKnown RBP8.72□□□□□ -1.01
CPNE3-206ENST00000523469 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
CPNE3-206ENST00000523469 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
CPNE3-206ENST00000523469 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 X6R8D5 127 aa8.72□□□□□ -1.01
CPNE3-206ENST00000523469 ASXL2Q76L83 1435 aa8.71□□□□□ -1.01
CPNE3-206ENST00000523469 TLDC2A0PJX2 215 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 ABLIM1O14639 778 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 PAX4O43316 350 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 EFCAB14O75071 495 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 YBX1P67809 324 aaKnown RBP8.71□□□□□ -1.02
CPNE3-206ENST00000523469 RAB3GAP1Q15042 981 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 MROH9Q5TGP6 573 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 WWC2Q6AWC2 1192 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 RIOX2Q8IUF8 465 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 SYNPOQ8N3V7 929 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 NETO2Q8NC67 525 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 APPBP2Q92624 585 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 DIRC2Q96SL1 478 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 EPB41L4BQ9H329 900 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 ZNF552Q9H707 407 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-206ENST00000523469 CLDND1Q9NY35 253 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
CPNE3-206ENST00000523469 TRAF6Q9Y4K3 522 aa8.71□□□□□ -1.02
CPNE3-206ENST00000523469 NUDT19A8MXV4 375 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 PLD2O14939 933 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 NAT1P18440 290 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 FPR2P25090 351 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 OLFML2BQ68BL8 750 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 DCP1AQ9NPI6 582 aaPredicted RBP8.7□□□□□ -1.02
CPNE3-206ENST00000523469 FANCLQ9NW38 375 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 KLHL14Q9P2G3 628 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 NDOR1Q9UHB4 597 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 SFMBT1Q9UHJ3 866 aa8.7□□□□□ -1.02
CPNE3-206ENST00000523469 COA3Q9Y2R0 106 aaPredicted RBP8.7□□□□□ -1.02
CPNE3-206ENST00000523469 NTRK1P04629 796 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 RPTNQ6XPR3 784 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 ZNF605Q86T29 641 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 GSTCDQ8NEC7 633 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 ALG1Q9BT22 464 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms