RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 NSUN6Q8TEA1 469 aaKnown RBP14.4□□□□□ -0.1
VEGFA-223ENST00000523125 SCFD2Q8WU76 684 aa14.4□□□□□ -0.1
VEGFA-223ENST00000523125 COPS5Q92905 334 aa14.4□□□□□ -0.1
VEGFA-223ENST00000523125 MPHOSPH6Q99547 160 aaKnown RBP14.4□□□□□ -0.1
VEGFA-223ENST00000523125 LY9Q9HBG7 655 aa14.4□□□□□ -0.1
VEGFA-223ENST00000523125 B4DLN1 442 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 SLC27A2O14975 620 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 ZEB2O60315 1214 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
VEGFA-223ENST00000523125 PURAQ00577 322 aaKnown RBP14.39□□□□□ -0.11
VEGFA-223ENST00000523125 FPGSQ05932 587 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 SART3Q15020 963 aaKnown RBP14.39□□□□□ -0.11
VEGFA-223ENST00000523125 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 PIGSQ96S52 555 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 IWS1Q96ST2 819 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 MTMR10Q9NXD2 777 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 PCDHA1Q9Y5I3 950 aa14.39□□□□□ -0.11
VEGFA-223ENST00000523125 TRIP12Q14669 1992 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-223ENST00000523125 GBF1Q92538 1859 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 DOCK5Q9H7D0 1870 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 SCN5AQ14524 2016 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 A6NJR5 290 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 NKRFO15226 690 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■□□□□ 10.1
VEGFA-223ENST00000523125 CFBP00751 764 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 TXNP10599 105 aaKnown RBP14.38□□□□□ -0.11
VEGFA-223ENST00000523125 CPT1AP50416 773 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-223ENST00000523125 C16orf59Q7L2K0 433 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 OR6J1Q8NGC5 347 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 TRPV6Q9H1D0 765 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
VEGFA-223ENST00000523125 CHD9Q3L8U1 2897 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
VEGFA-223ENST00000523125 PRC1O43663 620 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 B4GALT4O60513 344 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 TTLL4Q14679 1199 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 STXBP2Q15833 593 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 SEPT14Q6ZU15 432 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 CATIPQ7Z7H3 387 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 ZNF654Q8IZM8 581 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 MTA3Q9BTC8 594 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 SEZ6LQ9BYH1 1024 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 MAP3K20Q9NYL2 800 aaKnown RBP14.37□□□□□ -0.11
VEGFA-223ENST00000523125 A0A0C4DFX4 3053 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 UMODL1Q5DID0 1318 aa14.37□□□□□ -0.11
VEGFA-223ENST00000523125 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-223ENST00000523125 NR3C2P08235 984 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 MYL3P08590 195 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 CSF2RAP15509 400 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 EIF2AK2P19525 551 aaKnown RBP14.36□□□□□ -0.11
VEGFA-223ENST00000523125 HOXA13P31271 388 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-223ENST00000523125 CYP2C18P33260 490 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 MCM5P33992 734 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 ARHGAP1Q07960 439 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 LY6KQ17RY6 165 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 MTG1Q9BT17 334 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-223ENST00000523125 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-223ENST00000523125 CDH23Q9H251 3354 aa14.36□□□□□ -0.11
VEGFA-223ENST00000523125 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 EIF3JO75822 258 aaKnown RBP14.35□□□□□ -0.11
VEGFA-223ENST00000523125 RGS20O76081 388 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 DDAH1O94760 285 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 SMAD3P84022 425 aaKnown RBP14.35□□□□□ -0.11
VEGFA-223ENST00000523125 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 TMEM87BQ96K49 555 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 RNPC3Q96LT9 517 aaKnown RBP14.35□□□□□ -0.11
VEGFA-223ENST00000523125 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.35□□□□□ -0.112e-12■■■□□ 14.6
VEGFA-223ENST00000523125 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 NOC4LQ9BVI4 516 aaKnown RBP14.35□□□□□ -0.11
VEGFA-223ENST00000523125 SPZ1Q9BXG8 430 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
VEGFA-223ENST00000523125 TANC1Q9C0D5 1861 aa14.35□□□□□ -0.11
VEGFA-223ENST00000523125 KPNA6O60684 536 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 SMARCA1P28370 1054 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 LIFRP42702 1097 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 TRAF1Q13077 416 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.111e-7■■□□□ 12.8
VEGFA-223ENST00000523125 PGM5Q15124 567 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 BRDTQ58F21 947 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-223ENST00000523125 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 TMTC2Q8N394 836 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 AFG1LQ8WV93 481 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms