RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RMDN3Q96TC7 470 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 LAMA3Q16787 3333 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 B4DLN1 442 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 TIMP1P01033 207 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 CD4P01730 458 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 TXNP10599 105 aaKnown RBP21.71■■□□□ 1.07
SPIDR-220ENST00000522900 EIF2AK2P19525 551 aaKnown RBP21.71■■□□□ 1.07
SPIDR-220ENST00000522900 HSD17B4P51659 736 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 MRPL12P52815 198 aaKnown RBP21.71■■□□□ 1.07
SPIDR-220ENST00000522900 PPP2R5BQ15173 497 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 SCFD2Q8WU76 684 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 PIBF1Q8WXW3 757 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 MROH7Q68CQ1 1323 aa21.71■■□□□ 1.07
SPIDR-220ENST00000522900 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
SPIDR-220ENST00000522900 HOXA13P31271 388 aaPredicted RBP21.7■■□□□ 1.06
SPIDR-220ENST00000522900 MCM5P33992 734 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 ARHGEF16Q5VV41 709 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 CCDC62Q6P9F0 684 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 CASC1Q6TDU7 716 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 SEPT14Q6ZU15 432 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 ZNF654Q8IZM8 581 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 CCDC136Q96JN2 1154 aa21.7■■□□□ 1.06
SPIDR-220ENST00000522900 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 MYL3P08590 195 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 PURAQ00577 322 aaKnown RBP21.69■■□□□ 1.06
SPIDR-220ENST00000522900 GHRHRQ02643 423 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 FPGSQ05932 587 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 LY6KQ17RY6 165 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 GPR153Q6NV75 609 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 DEFB123Q8N688 67 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 IWS1Q96ST2 819 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 TRPV6Q9H1D0 765 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 PXMP2Q9NR77 195 aa21.69■■□□□ 1.06
SPIDR-220ENST00000522900 NKRFO15226 690 aaKnown RBP eCLIP21.68■■□□□ 1.06
SPIDR-220ENST00000522900 TLR3O15455 904 aaKnown RBP21.68■■□□□ 1.06
SPIDR-220ENST00000522900 NR3C2P08235 984 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 CPT1AP50416 773 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 STXBP2Q15833 593 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 NFXL1Q6ZNB6 911 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 PPP1R13LQ8WUF5 828 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 TMEM87BQ96K49 555 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 MTA3Q9BTC8 594 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 PPP1R12CQ9BZL4 782 aa21.68■■□□□ 1.06
SPIDR-220ENST00000522900 A6NJR5 290 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 RXRAP19793 462 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 TTLL4Q14679 1199 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 MFSD5Q6N075 450 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 MAP3K14Q99558 947 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 POLR3EQ9NVU0 708 aa21.67■■□□□ 1.06
SPIDR-220ENST00000522900 LAMA2P24043 3122 aaKnown RBP21.67■■□□□ 1.06
SPIDR-220ENST00000522900 UMODL1Q5DID0 1318 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 B4GALT4O60513 344 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 CDC45O75419 566 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 EIF3JO75822 258 aaKnown RBP21.66■■□□□ 1.06
SPIDR-220ENST00000522900 DDAH1O94760 285 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 PLEKHA8P1O95397 391 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 CYP2C18P33260 490 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 C16orf59Q7L2K0 433 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 RASEFQ8IZ41 740 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 CMTR1Q8N1G2 835 aaKnown RBP21.66■■□□□ 1.06
SPIDR-220ENST00000522900 TMTC2Q8N394 836 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 SRBD1Q8N5C6 995 aaKnown RBP21.66■■□□□ 1.06
SPIDR-220ENST00000522900 CTCFLQ8NI51 663 aaPredicted RBP21.66■■□□□ 1.06
SPIDR-220ENST00000522900 ZFP91Q96JP5 570 aaPredicted RBP21.66■■□□□ 1.06
SPIDR-220ENST00000522900 PDCD2LQ9BRP1 358 aa21.66■■□□□ 1.06
SPIDR-220ENST00000522900 CCDC69A6NI79 296 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 GCOM1H8Y6P7 765 aaPredicted RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 RGS20O76081 388 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 POLR2MP0CAP2 368 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 MYCLP12524 364 aaPredicted RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 CSF2RAP15509 400 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 LIFRP42702 1097 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 FCHSD1Q86WN1 690 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 IL31RAQ8NI17 732 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 AFG1LQ8WV93 481 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 MTG1Q9BT17 334 aaPredicted RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
SPIDR-220ENST00000522900 ALDH8A1Q9H2A2 487 aaPredicted RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 MAP3K20Q9NYL2 800 aaKnown RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 DDX41Q9UJV9 622 aaKnown RBP21.65■■□□□ 1.06
SPIDR-220ENST00000522900 KIF5BP33176 963 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 ARHGAP1Q07960 439 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 TRAF1Q13077 416 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 ADCK5Q3MIX3 580 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 SAMD3Q8N6K7 520 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 RNPC3Q96LT9 517 aaKnown RBP21.64■■□□□ 1.05
SPIDR-220ENST00000522900 TRMT13Q9NUP7 481 aaKnown RBP21.64■■□□□ 1.05
SPIDR-220ENST00000522900 MTMR10Q9NXD2 777 aa21.64■■□□□ 1.05
SPIDR-220ENST00000522900 ACRP10323 421 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 EXOSC10Q01780 885 aaKnown RBP21.63■■□□□ 1.05
SPIDR-220ENST00000522900 PGM5Q15124 567 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 NBPF20Q3BBV1 942 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 BRDTQ58F21 947 aaPredicted RBP21.63■■□□□ 1.05
SPIDR-220ENST00000522900 VSIG10LQ86VR7 867 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 RRP36Q96EU6 259 aaKnown RBP21.63■■□□□ 1.05
SPIDR-220ENST00000522900 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 NEK1Q96PY6 1258 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms