RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DBF4Q9UBU7 674 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-210ENST00000522843 CPA4Q9UI42 421 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 SNCAIPQ9Y6H5 919 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 CYP2E1P05181 493 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-210ENST00000522843 ZAP70P43403 619 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 CTSWP56202 376 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 PRKCZQ05513 592 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 KIF22Q14807 665 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 ABI1Q8IZP0 508 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 CCDC191Q8NCU4 936 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 GIMAP7Q8NHV1 300 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
SDCBP-210ENST00000522843 GUCD1Q96NT3 240 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 ZMYND8Q9ULU4 1186 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-210ENST00000522843 GABRQQ9UN88 632 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 LEMD3Q9Y2U8 911 aa8.55□□□□□ -1.04
SDCBP-210ENST00000522843 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 ARAP2Q8WZ64 1704 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 H3BRJ5 948 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 NEFMP07197 916 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 MOGSQ13724 837 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 FDX2Q6P4F2 183 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 GPR152Q8TDT2 470 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 MFSD14AQ96MC6 490 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 CDC5LQ99459 802 aaKnown RBP8.54□□□□□ -1.04
SDCBP-210ENST00000522843 RUSC1Q9BVN2 902 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 TMEM39BQ9GZU3 492 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 ZCCHC17Q9NP64 241 aaKnown RBP8.54□□□□□ -1.04
SDCBP-210ENST00000522843 HYPKQ9NX55 129 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 CWC25Q9NXE8 425 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-210ENST00000522843 ZNF70Q9UC06 446 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-210ENST00000522843 RAPGEFL1Q9UHV5 662 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 MAPK8IP3Q9UPT6 1336 aa8.54□□□□□ -1.04
SDCBP-210ENST00000522843 MYH3P11055 1940 aa8.53□□□□□ -1.04
SDCBP-210ENST00000522843 IGKV5-2P06315 115 aa8.53□□□□□ -1.04
SDCBP-210ENST00000522843 HOXB7P09629 217 aa8.53□□□□□ -1.04
SDCBP-210ENST00000522843 CETPP11597 493 aa8.53□□□□□ -1.04
SDCBP-210ENST00000522843 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 TMPOP42166 694 aaKnown RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 ZKSCAN4Q969J2 545 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 PAWRQ96IZ0 340 aaKnown RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 TDRD3Q9H7E2 651 aaKnown RBP8.53□□□□□ -1.04
SDCBP-210ENST00000522843 RPTORQ8N122 1335 aa8.53□□□□□ -1.04
SDCBP-210ENST00000522843 MGAMO43451 1857 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 MEGF11A6BM72 1044 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 MYO1BO43795 1136 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 GAS2O43903 313 aaKnown RBP8.52□□□□□ -1.05
SDCBP-210ENST00000522843 IL1R1P14778 569 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 SYN1P17600 705 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
SDCBP-210ENST00000522843 NLRP12P59046 1061 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 FKBP1AP62942 108 aaKnown RBP8.52□□□□□ -1.05
SDCBP-210ENST00000522843 UBXN2AP68543 259 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 C7orf61Q8IZ16 206 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 TDHQ8IZJ6 230 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 DEFB118Q96PH6 123 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-210ENST00000522843 PAK6Q9NQU5 681 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-210ENST00000522843 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 A0A1B0GUL6 1792 aa8.52□□□□□ -1.05
SDCBP-210ENST00000522843 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-210ENST00000522843 TCP10L2B9ZVM9 353 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 ZBTB39O15060 712 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 CHRNDQ07001 517 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 PPIL2Q13356 520 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 SNAPC2Q13487 334 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 DUSP27Q5VZP5 1158 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 C15orf52Q6ZUT6 534 aaKnown RBP8.51□□□□□ -1.05
SDCBP-210ENST00000522843 ANKRD23Q86SG2 305 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 ERO1BQ86YB8 467 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 STIM2Q9P246 746 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 BIN2Q9UBW5 565 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-210ENST00000522843 LAS1LQ9Y4W2 734 aaKnown RBP8.51□□□□□ -1.05
SDCBP-210ENST00000522843 CSADQ9Y600 493 aa8.51□□□□□ -1.05
SDCBP-210ENST00000522843 PDHXO00330 501 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 ADCY3O60266 1144 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 TAF5LO75529 589 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 TFRCP02786 760 aaKnown RBP8.5□□□□□ -1.05
SDCBP-210ENST00000522843 FOSL1P15407 271 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 HOXD10P28358 340 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 RBM5P52756 815 aaKnown RBP eCLIP8.5□□□□□ -1.05
SDCBP-210ENST00000522843 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
SDCBP-210ENST00000522843 DOCK3Q8IZD9 2030 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 SLC7A3Q8WY07 619 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 ANKRD2Q9GZV1 360 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 CCDC39Q9UFE4 941 aa8.5□□□□□ -1.05
SDCBP-210ENST00000522843 WDHD1O75717 1129 aaPredicted RBP8.49□□□□□ -1.05
SDCBP-210ENST00000522843 F13BP05160 661 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 CYP2C8P10632 490 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 IGHMBP2P38935 993 aaKnown RBP8.49□□□□□ -1.05
SDCBP-210ENST00000522843 ARL4DP49703 201 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 FLT3LGP49771 235 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 CACNB3P54284 484 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 CASP7P55210 303 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 TNFAIP1Q13829 316 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 CPSF6Q16630 551 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms