RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CATSPER4	Q7RTX7	472 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	SKA1	Q96BD8	255 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	VPS33B	Q9H267	617 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	MYOM2	P54296	1465 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653		B4E1Z4	1266 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PDE8B	O95263	885 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	LDHA	P00338	332 aa	Known RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PDE6A	P16499	860 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	RAPGEF1	Q13905	1077 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	POLA2	Q14181	598 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	KRT81	Q14533	505 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PIK3AP1	Q6ZUJ8	805 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	CNGA4	Q8IV77	575 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	LMNTD2	Q8IXW0	634 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	HINFP	Q9BQA5	517 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	ZHX2	Q9Y6X8	837 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	TTC37	Q6PGP7	1564 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	KDM1A	O60341	852 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PPFIA1	Q13136	1202 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	ASIC2	Q16515	512 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	ARL13B	Q3SXY8	428 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PREPL	Q4J6C6	727 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	ANKRD13A	Q8IZ07	590 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	TMEM206	Q9H813	350 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	MAP3K4	Q9Y6R4	1608 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	SAMD9L	Q8IVG5	1584 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	COL15A1	P39059	1388 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	CHML	P26374	656 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	PPP2R5D	Q14738	602 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	RNF207	Q6ZRF8	634 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	SLC7A5P2	Q9GIP4	190 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	SAMD15	Q9P1V8	674 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	GCLC	P48506	637 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	RINT1	Q6NUQ1	792 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	NSUN6	Q8TEA1	469 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	TRIM7	Q9C029	511 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	INO80B-WBP1	J3KQ70	363 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	SNX17	Q15036	470 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	NBPF15	Q8N660	670 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	MED4	Q9NPJ6	270 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	ZBTB1	Q9Y2K1	713 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	MYC	P01106	439 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	GCK	P35557	465 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	CRK	P46108	304 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	HNRNPH2	P55795	449 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	INHBE	P58166	350 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	BTBD8	Q5XKL5	378 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	CABP7	Q86V35	215 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	ZNF577	Q9BSK1	485 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	DDX41	Q9UJV9	622 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	STRIP2	Q9ULQ0	834 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	TMEM110-MUSTN1	A8MSY1	372 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	BRD2	P25440	801 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	ZNF365	Q70YC5	407 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	PNMA1	Q8ND90	353 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	ACAD9	Q9H845	621 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	ADARB2	Q9NS39	739 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	MSRA	Q9UJ68	235 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	LSM7	Q9UK45	103 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	KAT6B	Q8WYB5	2073 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	CLASP1	Q7Z460	1538 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653		A6NJR5	290 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653		K7ENM7	598 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	CUTA	O60888	179 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	NEK8	Q86SG6	692 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	PCSK9	Q8NBP7	692 aa	Known RBP	11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	FAM71B	Q8TC56	605 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	LGR6	Q9HBX8	967 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	POLI	Q9UNA4	740 aa		11.28	□□□□□ -0.6
TCF7-223	ENST00000522653	GYG1	P46976	350 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	ATP2A3	Q93084	1043 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	MRFAP1L1	Q96HT8	127 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	CAPZA3	Q96KX2	299 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	LRRC4	Q9HBW1	653 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	GUCA1B	Q9UMX6	200 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	CAPN7	Q9Y6W3	813 aa		11.27	□□□□□ -0.6
TCF7-223	ENST00000522653	ZBTB7B	O15156	539 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	PRR16	Q569H4	304 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	CEP85L	Q5SZL2	805 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	RUFY3	Q7L099	469 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	CCDC84	Q86UT8	332 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	TTC30A	Q86WT1	665 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	NEK9	Q8TD19	979 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	PREX2	Q70Z35	1606 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	KLRF2	D3W0D1	207 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	PSMC4	P43686	418 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	TIMM10	P62072	90 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	PRKCQ	Q04759	706 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	LRMP	Q12912	555 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	NBPF20	Q3BBV1	942 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	LRRC8A	Q8IWT6	810 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	TBC1D19	Q8N5T2	526 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	APOL6	Q9BWW8	343 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	ASAP1	Q9ULH1	1129 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	MBD5	Q9P267	1494 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms