RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TMEM67Q5HYA8 995 aa24.08■■□□□ 1.45
SDCBP-209ENST00000522243 ZNF697Q5TEC3 545 aa24.08■■□□□ 1.45
SDCBP-209ENST00000522243 FAM109BQ6ICB4 259 aaPredicted RBP24.08■■□□□ 1.45
SDCBP-209ENST00000522243 NSUN6Q8TEA1 469 aaKnown RBP24.08■■□□□ 1.45
SDCBP-209ENST00000522243 PPP1R13LQ8WUF5 828 aa24.08■■□□□ 1.45
SDCBP-209ENST00000522243 RMDN3Q96TC7 470 aa24.08■■□□□ 1.45
SDCBP-209ENST00000522243 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.08■■□□□ 1.45
SDCBP-209ENST00000522243 UMODL1Q5DID0 1318 aa24.08■■□□□ 1.44
SDCBP-209ENST00000522243 OPLAHO14841 1288 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 ZBTB5O15062 677 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 NKRFO15226 690 aaKnown RBP eCLIP24.07■■□□□ 1.443e-7■■■■□ 24.1
SDCBP-209ENST00000522243 ACRP10323 421 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 EIF2AK2P19525 551 aaKnown RBP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 PURAQ00577 322 aaKnown RBP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 PPIGQ13427 754 aaKnown RBP eCLIP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 TTLL4Q14679 1199 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 SART3Q15020 963 aaKnown RBP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 ARHGEF16Q5VV41 709 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 MB21D2Q8IYB1 491 aaPredicted RBP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 TMEM199Q8N511 208 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 PIGSQ96S52 555 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 MAF1Q9H063 256 aa24.07■■□□□ 1.44
SDCBP-209ENST00000522243 GPHNQ9NQX3 736 aaPredicted RBP24.07■■□□□ 1.44
SDCBP-209ENST00000522243 KIAA1217Q5T5P2 1943 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 SMAD3P84022 425 aaKnown RBP24.06■■□□□ 1.44
SDCBP-209ENST00000522243 C16orf59Q7L2K0 433 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 IGDCC4Q8TDY8 1250 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 GUCD1Q96NT3 240 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 LSG1Q9H089 658 aaKnown RBP24.06■■□□□ 1.44
SDCBP-209ENST00000522243 HIPK3Q9H422 1215 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 STXBP5LQ9Y2K9 1186 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 PCDHA1Q9Y5I3 950 aa24.06■■□□□ 1.44
SDCBP-209ENST00000522243 BAZ2BQ9UIF8 2168 aaKnown RBP24.06■■□□□ 1.44
SDCBP-209ENST00000522243 CYTH3O43739 400 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 TROAPQ12815 778 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 STXBP2Q15833 593 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 LY6KQ17RY6 165 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 BRDTQ58F21 947 aaPredicted RBP24.05■■□□□ 1.44
SDCBP-209ENST00000522243 TMEM240Q5SV17 173 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 PIBF1Q8WXW3 757 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 ESYT1Q9BSJ8 1104 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 MTG1Q9BT17 334 aaPredicted RBP24.05■■□□□ 1.44
SDCBP-209ENST00000522243 RIOX1Q9H6W3 641 aa24.05■■□□□ 1.44
SDCBP-209ENST00000522243 HOXA13P31271 388 aaPredicted RBP24.04■■□□□ 1.44
SDCBP-209ENST00000522243 HSD17B4P51659 736 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 CCL23P55773 120 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 CCDC62Q6P9F0 684 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 CATIPQ7Z7H3 387 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 IWS1Q96ST2 819 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 MYL10Q9BUA6 226 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 SEZ6LQ9BYH1 1024 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 ALDH8A1Q9H2A2 487 aaPredicted RBP24.04■■□□□ 1.44
SDCBP-209ENST00000522243 PXMP2Q9NR77 195 aa24.04■■□□□ 1.44
SDCBP-209ENST00000522243 TRMT13Q9NUP7 481 aaKnown RBP24.04■■□□□ 1.44
SDCBP-209ENST00000522243 A6NJR5 290 aa24.03■■□□□ 1.44
SDCBP-209ENST00000522243 FAM47CQ5HY64 1035 aa24.03■■□□□ 1.44
SDCBP-209ENST00000522243 ZNF365Q70YC5 407 aa24.03■■□□□ 1.44
SDCBP-209ENST00000522243 SLC17A8Q8NDX2 589 aa24.03■■□□□ 1.44
SDCBP-209ENST00000522243 NOC4LQ9BVI4 516 aaKnown RBP24.03■■□□□ 1.44
SDCBP-209ENST00000522243 SLC27A2O14975 620 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 NR3C2P08235 984 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 MYCLP12524 364 aaPredicted RBP24.02■■□□□ 1.44
SDCBP-209ENST00000522243 CHMP4BP1P59074 171 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 COL9A3Q14050 684 aaPredicted RBP24.02■■□□□ 1.44
SDCBP-209ENST00000522243 NBPF20Q3BBV1 942 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 AFG1LQ8WV93 481 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 SEMA6BQ9H3T3 888 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 LY9Q9HBG7 655 aa24.02■■□□□ 1.44
SDCBP-209ENST00000522243 SCN10AQ9Y5Y9 1956 aa24.02■■□□□ 1.43
SDCBP-209ENST00000522243 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.01■■□□□ 1.43
SDCBP-209ENST00000522243 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.01■■□□□ 1.43
SDCBP-209ENST00000522243 PRC1O43663 620 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 GH1P01241 217 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 CYP2C9P11712 490 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 CASC1Q6TDU7 716 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 CENPQQ7L2Z9 268 aaPredicted RBP24.01■■□□□ 1.43
SDCBP-209ENST00000522243 ZNF654Q8IZM8 581 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 WNT8AQ9H1J5 351 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 TTYH1Q9H313 450 aaPredicted RBP24.01■■□□□ 1.43
SDCBP-209ENST00000522243 IL23AQ9NPF7 189 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 ANO2Q9NQ90 1003 aa24.01■■□□□ 1.43
SDCBP-209ENST00000522243 MYH7BA7E2Y1 1941 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 PNMA6FA0A0J9YX94 578 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 KPNA6O60684 536 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 EIF3JO75822 258 aaKnown RBP24■■□□□ 1.43
SDCBP-209ENST00000522243 GHRHRQ02643 423 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 ARHGAP1Q07960 439 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 CREB3L3Q68CJ9 461 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 FCHSD1Q86WN1 690 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 ZFP91Q96JP5 570 aaPredicted RBP24■■□□□ 1.43
SDCBP-209ENST00000522243 PDCD2LQ9BRP1 358 aa24■■□□□ 1.43
SDCBP-209ENST00000522243 DDX41Q9UJV9 622 aaKnown RBP24■■□□□ 1.43
SDCBP-209ENST00000522243 MMP3P08254 477 aa23.99■■□□□ 1.43
SDCBP-209ENST00000522243 PSRC1Q6PGN9 363 aaPredicted RBP23.99■■□□□ 1.43
SDCBP-209ENST00000522243 NFXL1Q6ZNB6 911 aa23.99■■□□□ 1.43
SDCBP-209ENST00000522243 SCLYQ96I15 445 aa23.99■■□□□ 1.43
SDCBP-209ENST00000522243 CDX2Q99626 313 aaPredicted RBP23.99■■□□□ 1.43
SDCBP-209ENST00000522243 MAP3K20Q9NYL2 800 aaKnown RBP23.99■■□□□ 1.43
SDCBP-209ENST00000522243 MRVI1Q9Y6F6 885 aa23.99■■□□□ 1.43
SDCBP-209ENST00000522243 GRXCR1A8MXD5 290 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms