RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 CYP2C18P33260 490 aa21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 TRAF1Q13077 416 aa21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 STXBP2Q15833 593 aa21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 PSRC1Q6PGN9 363 aaPredicted RBP21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 MTG1Q9BT17 334 aaPredicted RBP21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 SEMA6BQ9H3T3 888 aa21.48■■□□□ 1.03
TOP1MT-216ENST00000522121 PALM3A6NDB9 673 aaPredicted RBP21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 A6NJR5 290 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 ZBTB5O15062 677 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 B4GALT4O60513 344 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 CFBP00751 764 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 SUPT20HL2P0C7V6 817 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 WTAPQ15007 396 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 TMEM240Q5SV17 173 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 ARHGEF16Q5VV41 709 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 MAP4K1Q92918 833 aa21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 ALDH8A1Q9H2A2 487 aaPredicted RBP21.47■■□□□ 1.03
TOP1MT-216ENST00000522121 TMEM265A0A087WTH1 108 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 GRM4Q14833 912 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 SEPT14Q6ZU15 432 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 C16orf59Q7L2K0 433 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 COPS5Q92905 334 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 IL23AQ9NPF7 189 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 MAP3K20Q9NYL2 800 aaKnown RBP21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 COL20A1Q9P218 1284 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 PCDHA1Q9Y5I3 950 aa21.46■■□□□ 1.03
TOP1MT-216ENST00000522121 LAMA2P24043 3122 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 ACRP10323 421 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 TMEM67Q5HYA8 995 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 SAMD3Q8N6K7 520 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 MTMR8Q96EF0 704 aa21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 CDX2Q99626 313 aaPredicted RBP21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 NOC4LQ9BVI4 516 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 MTIF3Q9H2K0 278 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-216ENST00000522121 GH1P01241 217 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 EIF2AK2P19525 551 aaKnown RBP21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 HSD17B4P51659 736 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 CCL23P55773 120 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 FAM47CQ5HY64 1035 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 CCDC62Q6P9F0 684 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 HOMER1Q86YM7 354 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 PXMP2Q9NR77 195 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 RBM8AQ9Y5S9 174 aaKnown RBP21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
TOP1MT-216ENST00000522121 EIF3JO75822 258 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 ARIH2O95376 493 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 FGBP02675 491 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 NR3C2P08235 984 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 DNAJB2P25686 324 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 LY6KQ17RY6 165 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 NBPF20Q3BBV1 942 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 NFRKBQ6P4R8 1299 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 RPUSD2Q8IZ73 545 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 TTYH1Q9H313 450 aaPredicted RBP21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 RIOX1Q9H6W3 641 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 TRMT13Q9NUP7 481 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 UMODL1Q5DID0 1318 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 COL6A3P12111 3177 aa21.43■■□□□ 1.02
TOP1MT-216ENST00000522121 PPP1R11O60927 126 aaPredicted RBP21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 GHRHRQ02643 423 aa21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 TROAPQ12815 778 aa21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 RASIP1Q5U651 963 aa21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 MB21D2Q8IYB1 491 aaPredicted RBP21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 PIGSQ96S52 555 aa21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
TOP1MT-216ENST00000522121 PNMA6FA0A0J9YX94 578 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 OPLAHO14841 1288 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 PTPN11Q06124 597 aaPredicted RBP21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 IGDCC4Q8TDY8 1250 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
TOP1MT-216ENST00000522121 GCOM1H8Y6P7 765 aaPredicted RBP21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 POLR2MP0CAP2 368 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 CYP2C9P11712 490 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 CASTP20810 708 aaKnown RBP21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 ANTXR2P58335 489 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 CHMP4BP1P59074 171 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 ARHGAP1Q07960 439 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 TIFAQ96CG3 184 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 PDCD2LQ9BRP1 358 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 MTA3Q9BTC8 594 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 WNT8AQ9H1J5 351 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 NOD1Q9Y239 953 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 MRVI1Q9Y6F6 885 aa21.4■■□□□ 1.02
TOP1MT-216ENST00000522121 MMP3P08254 477 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 MYCLP12524 364 aaPredicted RBP21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 KIF5BP33176 963 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 SLC35G1Q2M3R5 365 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 KCNV1Q6PIU1 500 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 TMTC2Q8N394 836 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 CTCFLQ8NI51 663 aaPredicted RBP21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 MYLIPQ8WY64 445 aa21.39■■□□□ 1.01
TOP1MT-216ENST00000522121 SCLYQ96I15 445 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms