RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 WDR5P61964 334 aaKnown RBP10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 CNTN2Q02246 1040 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 MTX1Q13505 466 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 ASCL5Q7RTU5 278 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 ERMP1Q7Z2K6 904 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 TLK2Q86UE8 772 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 RNF135Q8IUD6 432 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 DYNLL2Q96FJ2 89 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 PDGFCQ9NRA1 345 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 DAXXQ9UER7 740 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 CEP250Q9BV73 2442 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 EEF2P13639 858 aaKnown RBP10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 RFC2P35250 354 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 COPB2P35606 906 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 ICA1Q05084 483 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 TAPT1Q6NXT6 567 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 PBXIP1Q96AQ6 731 aa10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 TGS1Q96RS0 853 aaKnown RBP10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 TRIP12Q14669 1992 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC9-212ENST00000521944 COL4A6Q14031 1691 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 ATRXP46100 2492 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 TMEM221A6NGB7 291 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 PROB1E7EW31 1015 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 M0R296 226 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 ATP2A1O14983 1001 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 IGSF3O75054 1194 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 BAIAP3O94812 1187 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 GJB5O95377 273 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 VCPP55072 806 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 DLX2Q07687 328 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 SMAD2Q15796 467 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 FAM133AQ8N9E0 248 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 PABPC5Q96DU9 382 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 MRPL38Q96DV4 380 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 ZNF512BQ96KM6 892 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 UPF3BQ9BZI7 483 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 FTOQ9C0B1 505 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 ANTXR1Q9H6X2 564 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 SIP14410 1827 aa10.76□□□□□ -0.69
TRAPPC9-212ENST00000521944 IDH1O75874 414 aaKnown RBP10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 SUPT20HL2P0C7V6 817 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 TCEAL5Q5H9L2 206 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 TTC39AQ5SRH9 613 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 RAD9AQ99638 391 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 PRRX2Q99811 253 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 MCM9Q9NXL9 1143 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
TRAPPC9-212ENST00000521944 PNMA6EA0A0J9YXQ4 647 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 MED19A0JLT2 244 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 CTC1Q2NKJ3 1217 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 TNNI3KQ59H18 835 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 CPXCR1Q8N123 301 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 FBXL6Q8N531 539 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 ATOH1Q92858 354 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 SLF1Q9BQI6 1058 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 AP5M1Q9H0R1 490 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 Q9Y3F1 56 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 FPGT-TNNI3KV9GXZ4 949 aa10.74□□□□□ -0.69
TRAPPC9-212ENST00000521944 FRYLO94915 3013 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 TANC1Q9C0D5 1861 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 H0Y858 1186 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 ZEB2O60315 1214 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 NBPF20Q3BBV1 942 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 KMT5BQ4FZB7 885 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 SDR42E1Q8WUS8 393 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 TLR9Q9NR96 1032 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 TLR7Q9NYK1 1049 aaKnown RBP10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 DBNLQ9UJU6 430 aaKnown RBP10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
TRAPPC9-212ENST00000521944 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 PRR23AA6NEV1 266 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 MBTPS2O43462 519 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 NBNO60934 754 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 AVPR2P30518 371 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 CLCN1P35523 988 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 ID4P47928 161 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 KCNJ6P48051 423 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 CDK8P49336 464 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms