RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 FUT8Q9BYC5 575 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 NHEJ1Q9H9Q4 299 aaPredicted RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 ZNF287Q9HBT7 754 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 MYMKA6NI61 221 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 BUB1O43683 1085 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 C2orf54Q08AI8 447 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 SLC30A10Q6XR72 485 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 CACNA2D4Q7Z3S7 1137 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 MKRN1Q9UHC7 482 aaKnown RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 ADCY7P51828 1080 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 USH1GQ495M9 461 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 WDR59Q6PJI9 974 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 DNAAF5Q86Y56 855 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 KIAA0895Q8NCT3 520 aa13.55□□□□□ -0.24
DENND3-217ENST00000521835 RIN2Q8WYP3 895 aaPredicted RBP13.55□□□□□ -0.24
DENND3-217ENST00000521835 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 SPA17Q15506 151 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 MSL1Q68DK7 614 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
DENND3-217ENST00000521835 KBTBD4Q9NVX7 518 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 NCK2O43639 380 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 ERLIN1O75477 346 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 STAT3P40763 770 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 HSP90B2PQ58FF3 399 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 CCDC51Q96ER9 411 aa13.54□□□□□ -0.24
DENND3-217ENST00000521835 DDX4Q9NQI0 724 aaKnown RBP13.54□□□□□ -0.24
DENND3-217ENST00000521835 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 TRAF5O00463 557 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 MEIS1O00470 390 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 RHOBTB3O94955 611 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 MOCS3O95396 460 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 CCNE1P24864 410 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 DNM2P50570 870 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 GTF2A1P52655 376 aaPredicted RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 DBNDD1Q9H9R9 158 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 USP40Q9NVE5 1235 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 PDHBP11177 359 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 CYLC1P35663 651 aaPredicted RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 ZMYND12Q9H0C1 365 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 SEMA6BQ9H3T3 888 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 KRT86O43790 486 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 HNRNPH2P55795 449 aaKnown RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
DENND3-217ENST00000521835 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
DENND3-217ENST00000521835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.53□□□□□ -0.24
DENND3-217ENST00000521835 CCDC151A5D8V7 595 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 E9PMD0 336 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 NFIAQ12857 509 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 TRIM14Q14142 442 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.24
DENND3-217ENST00000521835 DDX12PQ92771 950 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 IFIH1Q9BYX4 1025 aaKnown RBP13.52□□□□□ -0.24
DENND3-217ENST00000521835 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 KCNQ5Q9NR82 932 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 ITIH6Q6UXX5 1313 aa13.52□□□□□ -0.24
DENND3-217ENST00000521835 AMPD3Q01432 767 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 GRB10Q13322 594 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 PDS5AQ29RF7 1337 aaKnown RBP13.52□□□□□ -0.25
DENND3-217ENST00000521835 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.25
DENND3-217ENST00000521835 FGFBP2Q9BYJ0 223 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 CCSER1Q9C0I3 900 aa13.52□□□□□ -0.25
DENND3-217ENST00000521835 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 M0R2N6 131 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
DENND3-217ENST00000521835 CYP4A11Q02928 519 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms