RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 CCDC62Q6P9F0 684 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 CATIPQ7Z7H3 387 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 PIGSQ96S52 555 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 RMDN3Q96TC7 470 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 LY9Q9HBG7 655 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 GPHNQ9NQX3 736 aaPredicted RBP22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 MAP3K20Q9NYL2 800 aaKnown RBP22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 PCDHA1Q9Y5I3 950 aa22.45■■□□□ 1.18
R3HCC1-207ENST00000521588 COL9A3Q14050 684 aaPredicted RBP22.44■■□□□ 1.18
R3HCC1-207ENST00000521588 PPP2R5BQ15173 497 aa22.44■■□□□ 1.18
R3HCC1-207ENST00000521588 CREB3L3Q68CJ9 461 aa22.44■■□□□ 1.18
R3HCC1-207ENST00000521588 MAP3K14Q99558 947 aa22.44■■□□□ 1.18
R3HCC1-207ENST00000521588 POLR3EQ9NVU0 708 aa22.44■■□□□ 1.18
R3HCC1-207ENST00000521588 A6NJR5 290 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 TLR3O15455 904 aaKnown RBP22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 PRC1O43663 620 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 ARIH2O95376 493 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 CFBP00751 764 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 TXNP10599 105 aaKnown RBP22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 MCM5P33992 734 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 CPT1AP50416 773 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 FPGSQ05932 587 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 TTLL4Q14679 1199 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 MFSD5Q6N075 450 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 DEFB123Q8N688 67 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 SAMD3Q8N6K7 520 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 OR6J1Q8NGC5 347 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 COPS5Q92905 334 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
R3HCC1-207ENST00000521588 PNMA6FA0A0J9YX94 578 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 PSMC6P62333 389 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 PURAQ00577 322 aaKnown RBP22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 TRAF1Q13077 416 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 STXBP2Q15833 593 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 HOMER1Q86YM7 354 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 PXMP2Q9NR77 195 aa22.42■■□□□ 1.18
R3HCC1-207ENST00000521588 SH2B2O14492 632 aaPredicted RBP22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 NR3C2P08235 984 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 ARHGEF16Q5VV41 709 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 FAM109BQ6ICB4 259 aaPredicted RBP22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 CASC1Q6TDU7 716 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 Q7L0L9 218 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 ZNF654Q8IZM8 581 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 TMTC2Q8N394 836 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 TMEM87BQ96K49 555 aa22.41■■□□□ 1.18
R3HCC1-207ENST00000521588 EIF3JO75822 258 aaKnown RBP22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 DDAH1O94760 285 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 EIF2AK2P19525 551 aaKnown RBP22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 SMARCA1P28370 1054 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 SEPT14Q6ZU15 432 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 C16orf59Q7L2K0 433 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 MTG1Q9BT17 334 aaPredicted RBP22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 TRPV6Q9H1D0 765 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 MTMR10Q9NXD2 777 aa22.4■■□□□ 1.18
R3HCC1-207ENST00000521588 KIAA1217Q5T5P2 1943 aa22.39■■□□□ 1.18
R3HCC1-207ENST00000521588 KPNA6O60684 536 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 MYL3P08590 195 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 LIFRP42702 1097 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 BRDTQ58F21 947 aaPredicted RBP22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 PDCD2LQ9BRP1 358 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 MYL10Q9BUA6 226 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 SPZ1Q9BXG8 430 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 COL6A3P12111 3177 aa22.39■■□□□ 1.17
R3HCC1-207ENST00000521588 SCN10AQ9Y5Y9 1956 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 B4GALT4O60513 344 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 HOXA13P31271 388 aaPredicted RBP22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 ARHGAP1Q07960 439 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 LY6KQ17RY6 165 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 VSIG10LQ86VR7 867 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 PPP1R12CQ9BZL4 782 aa22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 ALDH8A1Q9H2A2 487 aaPredicted RBP22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 DDX41Q9UJV9 622 aaKnown RBP22.38■■□□□ 1.17
R3HCC1-207ENST00000521588 GCOM1H8Y6P7 765 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 CDC45O75419 566 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 GH1P01241 217 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 POLR2MP0CAP2 368 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 KIF5BP33176 963 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 CYP2C18P33260 490 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 SMAD3P84022 425 aaKnown RBP22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 PPIGQ13427 754 aaKnown RBP eCLIP22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 TMEM199Q8N511 208 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 LZTS2Q9BRK4 669 aa22.37■■□□□ 1.17
R3HCC1-207ENST00000521588 RGS20O76081 388 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 CSF2RAP15509 400 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 NBPF20Q3BBV1 942 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 TSGA10IPQ3SY00 556 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 CCDC136Q96JN2 1154 aa22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 RNPC3Q96LT9 517 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 NOC4LQ9BVI4 516 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-207ENST00000521588 UMODL1Q5DID0 1318 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 GNAQP50148 359 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 PGM5Q15124 567 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 TMEM240Q5SV17 173 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 NFXL1Q6ZNB6 911 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 SGMS1Q86VZ5 419 aa22.35■■□□□ 1.17
R3HCC1-207ENST00000521588 SRBD1Q8N5C6 995 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms