RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 BMP3P12645 472 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 GCFC2P16383 781 aaKnown RBP15.69■□□□□ 0.1
SMIM12-206ENST00000521580 DPEP1P16444 411 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 MTF1Q14872 753 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 HAS1Q92839 578 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 DHTKD1Q96HY7 919 aaPredicted RBP15.69■□□□□ 0.1
SMIM12-206ENST00000521580 PANX2Q96RD6 677 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
SMIM12-206ENST00000521580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.12e-6■□□□□ 9.8
SMIM12-206ENST00000521580 MYMKA6NI61 221 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 SOWAHDA6NJG2 315 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 NAA30Q147X3 362 aaPredicted RBP15.68■□□□□ 0.1
SMIM12-206ENST00000521580 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 CNNM4Q6P4Q7 775 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 FBXO11Q86XK2 927 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 IRF2BP1Q8IU81 584 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 MFAP3LO75121 409 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 SSBP05455 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMIM12-206ENST00000521580 TAL1P17542 331 aaPredicted RBP15.68■□□□□ 0.1
SMIM12-206ENST00000521580 FXR1P51114 621 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMIM12-206ENST00000521580 PDCL3Q9H2J4 239 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
SMIM12-206ENST00000521580 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
SMIM12-206ENST00000521580 GYPCP04921 128 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 SEMA3FQ13275 785 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 GMCL1P1Q8NEA9 526 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 P2RX5Q93086 422 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 ZNF70Q9UC06 446 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 A0A1W2PRG0 241 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 PRKCSHP14314 528 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 V9GYY5 206 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 TUBB4AP04350 444 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 CCNE1P24864 410 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 ECE1P42892 770 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 RAD54LQ92698 747 aa15.67■□□□□ 0.1
SMIM12-206ENST00000521580 HERC5Q9UII4 1024 aaKnown RBP15.67■□□□□ 0.1
SMIM12-206ENST00000521580 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
SMIM12-206ENST00000521580 MTERF4Q7Z6M4 381 aaKnown RBP15.66■□□□□ 0.1
SMIM12-206ENST00000521580 NAP1L4Q99733 375 aaKnown RBP15.66■□□□□ 0.1
SMIM12-206ENST00000521580 ITIH6Q6UXX5 1313 aa15.66■□□□□ 0.1
SMIM12-206ENST00000521580 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
SMIM12-206ENST00000521580 BAG6P46379 1132 aa15.66■□□□□ 0.1
SMIM12-206ENST00000521580 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
SMIM12-206ENST00000521580 DUSP9Q99956 384 aaKnown RBP15.66■□□□□ 0.1
SMIM12-206ENST00000521580 ARHGEF10LQ9HCE6 1279 aa15.66■□□□□ 0.1
SMIM12-206ENST00000521580 GREB1LQ9C091 1923 aaPredicted RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 SPDYE3A6NKU9 549 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 MEIS2O14770 477 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 VIL1P09327 827 aaKnown RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 GNG11P61952 73 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 GRIPAP1Q4V328 841 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 UNC13DQ70J99 1090 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 KIAA0895Q8NCT3 520 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 ACER1Q8TDN7 264 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 NOC3LQ8WTT2 800 aaKnown RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 PSMD1Q99460 953 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 SIPA1L1O43166 1804 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 GOLGA6L9A6NEM1 432 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 CCDC175P0C221 793 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 USP11P51784 963 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 ARHGAP4P98171 946 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 ECM1Q16610 540 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 PRR16Q569H4 304 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 TRIM65Q6PJ69 517 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 RAD9BQ6WBX8 426 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 MIGA2Q7L4E1 593 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 FAM151AQ8WW52 585 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 DDX12PQ92771 950 aa15.65■□□□□ 0.1
SMIM12-206ENST00000521580 NAA15Q9BXJ9 866 aaKnown RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 GTPBP4Q9BZE4 634 aaKnown RBP15.65■□□□□ 0.1
SMIM12-206ENST00000521580 LGALS16A8MUM7 142 aa15.64■□□□□ 0.1
SMIM12-206ENST00000521580 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.1
SMIM12-206ENST00000521580 HOXA13P31271 388 aaPredicted RBP15.64■□□□□ 0.1
SMIM12-206ENST00000521580 KRT9P35527 623 aa15.64■□□□□ 0.1
SMIM12-206ENST00000521580 PPP1R2P41236 205 aa15.64■□□□□ 0.1
SMIM12-206ENST00000521580 MTIF2P46199 727 aaKnown RBP15.64■□□□□ 0.1
SMIM12-206ENST00000521580 AP3B2Q13367 1082 aa15.64■□□□□ 0.1
SMIM12-206ENST00000521580 NIM1KQ8IY84 436 aa15.64■□□□□ 0.1
SMIM12-206ENST00000521580 URI1O94763 535 aaPredicted RBP15.64■□□□□ 0.09
SMIM12-206ENST00000521580 MB21D1Q8N884 522 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 TUBGCP2Q9BSJ2 902 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 PVALEFA0A1B0GWK0 134 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 B4DLN1 442 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 TMEM119Q4V9L6 283 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 CCDC51Q96ER9 411 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 CNOT6LQ96LI5 555 aaKnown RBP15.64■□□□□ 0.09
SMIM12-206ENST00000521580 GMLQ99445 158 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 LRRC27Q9C0I9 530 aa15.64■□□□□ 0.09
SMIM12-206ENST00000521580 TMEM39BQ9GZU3 492 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms