RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SFMBT1Q9UHJ3 866 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 NPFFR2Q9Y5X5 522 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 AQP7O14520 342 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 APPP05067 770 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 GLI1P08151 1106 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 PNLIPP16233 465 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 TAL1P17542 331 aaPredicted RBP7.51□□□□□ -1.21
SKP1-208ENST00000521216 GTF2A2P52657 109 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 LSAMPQ13449 338 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 TESK1Q15569 626 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 ADGRF1Q5T601 910 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 RSPO2Q6UXX9 243 aaPredicted RBP7.51□□□□□ -1.21
SKP1-208ENST00000521216 MAMDC2Q7Z304 686 aaPredicted RBP7.51□□□□□ -1.21
SKP1-208ENST00000521216 MTDHQ86UE4 582 aaKnown RBP7.51□□□□□ -1.21
SKP1-208ENST00000521216 TMEM169Q96HH4 297 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 SLC52A2Q9HAB3 445 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 CRTAC1Q9NQ79 661 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 CLDND1Q9NY35 253 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 FBXL7Q9UJT9 491 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 YBX2Q9Y2T7 364 aaKnown RBP7.51□□□□□ -1.21
SKP1-208ENST00000521216 CD2APQ9Y5K6 639 aa7.51□□□□□ -1.21
SKP1-208ENST00000521216 C22orf46C9J442 243 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 PLD2O14939 933 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 CLSTN1O94985 981 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 FPR2P25090 351 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 CORO7P57737 925 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 GPR85P60893 370 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 GUCY1A3Q02108 690 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 TKFCQ3LXA3 575 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 LBX2Q6XYB7 198 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 CABP7Q86V35 215 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 ZFYVE21Q9BQ24 234 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 MRPL4Q9BYD3 311 aaKnown RBP7.5□□□□□ -1.21
SKP1-208ENST00000521216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.21
SKP1-208ENST00000521216 PCDHA9Q9Y5H5 950 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 PCDHA8Q9Y5H6 950 aa7.5□□□□□ -1.21
SKP1-208ENST00000521216 NUDT19A8MXV4 375 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
SKP1-208ENST00000521216 ITGB5P18084 799 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 LIN37Q96GY3 246 aaPredicted RBP7.49□□□□□ -1.21
SKP1-208ENST00000521216 INTS4Q96HW7 963 aaKnown RBP7.49□□□□□ -1.21
SKP1-208ENST00000521216 MAGEB10Q96LZ2 347 aaPredicted RBP7.49□□□□□ -1.21
SKP1-208ENST00000521216 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 ALG1Q9BT22 464 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 SLC6A17Q9H1V8 727 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 PPARGC1AQ9UBK2 798 aaKnown RBP7.49□□□□□ -1.21
SKP1-208ENST00000521216 FBLN5Q9UBX5 448 aa7.49□□□□□ -1.21
SKP1-208ENST00000521216 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 ENPP3O14638 875 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 EFCAB14O75071 495 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 CRTAMO95727 393 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 HSD3B2P26439 372 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 KIZQ2M2Z5 673 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 SYNPOQ8N3V7 929 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.48□□□□□ -1.215e-46■■□□□ 14
SKP1-208ENST00000521216 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 RXFP1Q9HBX9 757 aa7.48□□□□□ -1.21
SKP1-208ENST00000521216 DBR1Q9UK59 544 aaKnown RBP7.48□□□□□ -1.21
SKP1-208ENST00000521216 COA3Q9Y2R0 106 aaPredicted RBP7.48□□□□□ -1.21
SKP1-208ENST00000521216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.47□□□□□ -1.21
SKP1-208ENST00000521216 RASGRP1O95267 797 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 NTRK1P04629 796 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 MPOP05164 745 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 SRGAP2CP0DJJ0 459 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.218e-43■■□□□ 12.4
SKP1-208ENST00000521216 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 FNDC3BQ53EP0 1204 aaKnown RBP7.47□□□□□ -1.21
SKP1-208ENST00000521216 NLRP10Q86W26 655 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 FEZ1Q99689 392 aa7.47□□□□□ -1.21
SKP1-208ENST00000521216 ZC3H12DA2A288 527 aaKnown RBP7.46□□□□□ -1.22
SKP1-208ENST00000521216 OR14I1A6ND48 311 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 ZNF503-AS2A6NEH8 195 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 F8W031 263 aaPredicted RBP7.46□□□□□ -1.22
SKP1-208ENST00000521216 SOD2P04179 222 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 GRK2P25098 689 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 GRK3P35626 688 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 FGD2Q7Z6J4 655 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 ZC3H7AQ8IWR0 971 aaKnown RBP7.46□□□□□ -1.22
SKP1-208ENST00000521216 SLKQ9H2G2 1235 aaPredicted RBP7.46□□□□□ -1.22
SKP1-208ENST00000521216 SHROOM4Q9ULL8 1493 aa7.46□□□□□ -1.22
SKP1-208ENST00000521216 CARMIL2Q6F5E8 1435 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 H7BY64 318 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 DBHP09172 617 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 NAT1P18440 290 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 RBM10P98175 930 aaKnown RBP7.45□□□□□ -1.22
SKP1-208ENST00000521216 PAK1Q13153 545 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 TRIM61Q5EBN2 209 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 WWC2Q6AWC2 1192 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 ZNF605Q86T29 641 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
SKP1-208ENST00000521216 GSTCDQ8NEC7 633 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 IPPKQ9H8X2 491 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 TNFRSF12AQ9NP84 129 aa7.45□□□□□ -1.22
SKP1-208ENST00000521216 FAM47E-STBD1D6RA91 191 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms