RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.066e-8■■■■□ 26.3
TVP23C-206ENST00000521179 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 MKRN2Q9H000 416 aaKnown RBP8.42□□□□□ -1.06
TVP23C-206ENST00000521179 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
TVP23C-206ENST00000521179 BTG4Q9NY30 223 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 OAS3Q9Y6K5 1087 aaKnown RBP8.42□□□□□ -1.06
TVP23C-206ENST00000521179 TTC21BQ7Z4L5 1316 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-206ENST00000521179 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
TVP23C-206ENST00000521179 USP6P35125 1406 aa8.42□□□□□ -1.06
TVP23C-206ENST00000521179 ATRNO75882 1429 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
TVP23C-206ENST00000521179 GCP02774 474 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 EVA1CP58658 441 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-206ENST00000521179 PPP2R5EQ16537 467 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-206ENST00000521179 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
TVP23C-206ENST00000521179 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
TVP23C-206ENST00000521179 SLIT2O94813 1529 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 KIAA0232Q92628 1395 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 TTC21AQ8NDW8 1320 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 ESR1P03372 595 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
TVP23C-206ENST00000521179 VPS72Q15906 364 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 TNNI3KQ59H18 835 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 TMC3Q7Z5M5 1100 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 C7orf61Q8IZ16 206 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 ABI1Q8IZP0 508 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 SYTL5Q8TDW5 730 aaPredicted RBP8.4□□□□□ -1.06
TVP23C-206ENST00000521179 POLR3GLQ9BT43 218 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 PRR13Q9NZ81 148 aa8.4□□□□□ -1.06
TVP23C-206ENST00000521179 ABCA3Q99758 1704 aa8.4□□□□□ -1.07
TVP23C-206ENST00000521179 CPSF1Q10570 1443 aaKnown RBP8.39□□□□□ -1.07
TVP23C-206ENST00000521179 SSH2Q76I76 1423 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 USP19O94966 1318 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 SHOXO15266 292 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 HSPA5P11021 654 aaKnown RBP8.39□□□□□ -1.07
TVP23C-206ENST00000521179 ZP2Q05996 745 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 AXDND1Q5T1B0 1012 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-206ENST00000521179 TDRD10Q5VZ19 366 aaKnown RBP8.39□□□□□ -1.07
TVP23C-206ENST00000521179 SLC23A3Q6PIS1 610 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 DAGLBQ8NCG7 672 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 HDAC8Q9BY41 377 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 PCDHB12Q9Y5F1 795 aa8.39□□□□□ -1.07
TVP23C-206ENST00000521179 BRWD3Q6RI45 1802 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 AKAP12Q02952 1782 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 SIGLEC6O43699 453 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 SLC7A5Q01650 507 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 DDX10Q13206 875 aaKnown RBP8.38□□□□□ -1.07
TVP23C-206ENST00000521179 R3HDM1Q15032 1099 aaKnown RBP8.38□□□□□ -1.07
TVP23C-206ENST00000521179 PLCL1Q15111 1095 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 CLEC16AQ2KHT3 1053 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 GNPTABQ3T906 1256 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 NME9Q86XW9 330 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 KLHL6Q8WZ60 621 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
TVP23C-206ENST00000521179 FBXL21Q9UKT6 434 aa8.38□□□□□ -1.07
TVP23C-206ENST00000521179 COL14A1Q05707 1796 aaKnown RBP8.38□□□□□ -1.07
TVP23C-206ENST00000521179 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 TP53P04637 393 aaPredicted RBP8.37□□□□□ -1.07
TVP23C-206ENST00000521179 ANP32AP39687 249 aaKnown RBP8.37□□□□□ -1.07
TVP23C-206ENST00000521179 DCAF15Q66K64 600 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 CBLL1Q75N03 491 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 CREG2Q8IUH2 290 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 ZNF655Q8N720 491 aaPredicted RBP8.37□□□□□ -1.07
TVP23C-206ENST00000521179 MBNL3Q9NUK0 354 aaKnown RBP8.37□□□□□ -1.07
TVP23C-206ENST00000521179 ACTR10Q9NZ32 417 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 ADGRE2Q9UHX3 823 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 DUSP13Q9UII6 198 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 PCDHB10Q9UN67 800 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 CD163L1Q9NR16 1453 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 CRYBG1Q9Y4K1 1723 aa8.37□□□□□ -1.07
TVP23C-206ENST00000521179 A0A1W2PP64 1363 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 PHRF1Q9P1Y6 1649 aaKnown RBP8.36□□□□□ -1.07
TVP23C-206ENST00000521179 NINLQ9Y2I6 1382 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 ZBED9Q6R2W3 1325 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 PRAMEF1O95521 474 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 XP32Q5T750 250 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 TANGO6Q9C0B7 1094 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 CHST7Q9NS84 486 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 ADAMTS6Q9UKP5 1117 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.36□□□□□ -1.07
TVP23C-206ENST00000521179 NWD2Q9ULI1 1742 aa8.36□□□□□ -1.07
TVP23C-206ENST00000521179 EDC4Q6P2E9 1401 aaKnown RBP8.36□□□□□ -1.07
TVP23C-206ENST00000521179 CPDO75976 1380 aa8.35□□□□□ -1.07
TVP23C-206ENST00000521179 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
TVP23C-206ENST00000521179 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
TVP23C-206ENST00000521179 PIK3C2AO00443 1686 aa8.35□□□□□ -1.07
TVP23C-206ENST00000521179 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
TVP23C-206ENST00000521179 CD247P20963 164 aa8.35□□□□□ -1.07
TVP23C-206ENST00000521179 ZNF792Q3KQV3 632 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms