RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 NKX3-2P78367 333 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 KRT32Q14532 448 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 SNX17Q15036 470 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 TAPT1Q6NXT6 567 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 PCSK9Q8NBP7 692 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 Q9Y3F1 56 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 SYNRGQ9UMZ2 1314 aa12.09□□□□□ -0.47
TRAPPC9-209ENST00000521167 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 SH2B2O14492 632 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CALM1P0DP23 149 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CALM2P0DP24 149 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CALM3P0DP25 149 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 KIF5BP33176 963 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 GNAQP50148 359 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 GHRHRQ02643 423 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 HABP4Q5JVS0 413 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-209ENST00000521167 ADCY6O43306 1168 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 EDNRBP24530 442 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 BMP8BP34820 402 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 ACLYP53396 1101 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 RTP1P59025 263 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 PDE4DQ08499 809 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 KCNA10Q16322 511 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 DHX32Q7L7V1 743 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 SGMS1Q86VZ5 419 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 NUP133Q8WUM0 1156 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 KCNB2Q92953 911 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 FERMT2Q96AC1 680 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 PIGSQ96S52 555 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 IWS1Q96ST2 819 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 AP5M1Q9H0R1 490 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 PRO3102Q9H379 93 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
TRAPPC9-209ENST00000521167 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 CYTH3O43739 400 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 ZEB2O60315 1214 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 REC8O95072 547 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 SLC34A2O95436 690 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 SMPD1P17405 629 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 HSD17B4P51659 736 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 SLC35G1Q2M3R5 365 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 NOL8Q76FK4 1167 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 GDF15Q99988 308 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 ELP1O95163 1332 aa12.06□□□□□ -0.48
TRAPPC9-209ENST00000521167 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 NKRFO15226 690 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 CTAGE5O15320 804 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 CABYRO75952 493 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 CFBP00751 764 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 ASGR1P07306 291 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 HSPA4P34932 840 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 TLK2Q86UE8 772 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 GLT1D1Q96MS3 346 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 TOX2Q96NM4 488 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 RMDN3Q96TC7 470 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 SEZ6LQ9BYH1 1024 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 WDR11Q9BZH6 1224 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms