RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HP1BP3Q5SSJ5 553 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-208ENST00000521037 C1QL4Q86Z23 238 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 DPF2Q92785 391 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 SNX27Q96L92 541 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 ZFYVE1Q9HBF4 777 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 MKNK2Q9HBH9 465 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 AP4E1Q9UPM8 1137 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 SCAF8Q9UPN6 1271 aaKnown RBP5.29□□□□□ -1.56
VPS13B-208ENST00000521037 PCDHGC5Q9Y5F6 944 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 ZSWIM8A7E2V4 1837 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 SIPA1L3O60292 1781 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-208ENST00000521037 A0A087WZG4 1122 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 PPIP5K2O43314 1243 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 KCNQ3O43525 872 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 FAM87AP0C7U9 286 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 ALDH1B1P30837 517 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 PIP4K2AP48426 406 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-208ENST00000521037 OXCT1P55809 520 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 CDK5R2Q13319 367 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 LRIT3Q3SXY7 679 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 AMOTQ4VCS5 1084 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 LDLRAD1Q5T700 205 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 CLEC4GQ6UXB4 293 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 FAM214BQ7L5A3 538 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 NBPF5PQ86XG9 351 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-208ENST00000521037 NIM1KQ8IY84 436 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 CD99L2Q8TCZ2 262 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 PTPN18Q99952 460 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 VPS33BQ9H267 617 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF576Q9H609 170 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 DISC1Q9NRI5 854 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 RAD18Q9NS91 495 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 STAP2Q9UGK3 403 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 PTCH2Q9Y6C5 1203 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 CACNA1AO00555 2505 aa5.28□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF646O15015 1829 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-208ENST00000521037 SCN9AQ15858 1988 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 UBN2Q6ZU65 1347 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 ALPK3Q96L96 1907 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 LRRC37AA6NMS7 1700 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-208ENST00000521037 PSMD14O00487 310 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 CFPP27918 469 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 CTGFP29279 349 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 BMP8BP34820 402 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 ZNF280AP59817 542 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-208ENST00000521037 FKBP1BP68106 108 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 PTPN12Q05209 780 aaKnown RBP5.27□□□□□ -1.57
VPS13B-208ENST00000521037 PRAMEF18Q5VWM3 479 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 KSR1Q8IVT5 923 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 PI4K2BQ8TCG2 481 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 FANCD2OSQ96PS1 177 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 GMLQ99445 158 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 CORO1BQ9BR76 489 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 TNKS2Q9H2K2 1166 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 GGA3Q9NZ52 723 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 ATP6V0A2Q9Y487 856 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 USP16Q9Y5T5 823 aa5.27□□□□□ -1.57
VPS13B-208ENST00000521037 PPM1GO15355 546 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-208ENST00000521037 ZNF862O60290 1169 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 LEFTY1O75610 366 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 FAM13AO94988 1023 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 ZNF865P0CJ78 1059 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-208ENST00000521037 IFI16Q16666 785 aaKnown RBP5.26□□□□□ -1.57
VPS13B-208ENST00000521037 PHLDB3Q6NSJ2 640 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 IL17REQ8NFR9 667 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 SIN3AQ96ST3 1273 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 DUSP23Q9BVJ7 150 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
VPS13B-208ENST00000521037 CCDC86Q9H6F5 360 aaKnown RBP5.26□□□□□ -1.57
VPS13B-208ENST00000521037 CFAP54Q96N23 3096 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 KRT1P04264 644 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 LIG1P18858 919 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 IL13P35225 146 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 CRHR2Q13324 411 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 ECM1Q16610 540 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 MTHFSDQ2M296 383 aaKnown RBP5.25□□□□□ -1.57
VPS13B-208ENST00000521037 SLC23A3Q6PIS1 610 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 TPTE2Q6XPS3 522 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 LCNL1Q6ZST4 164 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 SH3TC2Q8TF17 1288 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 ARHGAP39Q9C0H5 1083 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 CHD7Q9P2D1 2997 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 FZD1Q9UP38 647 aa5.25□□□□□ -1.57
VPS13B-208ENST00000521037 ABCC4O15439 1325 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 RPTORQ8N122 1335 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 DCHS1Q96JQ0 3298 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 C5orf42Q9H799 3197 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 RBM47A0AV96 593 aaKnown RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 CARNS1A5YM72 827 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 H7C1D1 291 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 TCERG1O14776 1098 aaKnown RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 NTSR2O95665 410 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 STARD3NLO95772 234 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms