RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
MRPS28-206ENST00000520946 GRB10Q13322 594 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 USH1GQ495M9 461 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 COPS5Q92905 334 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 TMEM47Q9BQJ4 181 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 CDH23Q9H251 3354 aa13.51□□□□□ -0.25
MRPS28-206ENST00000520946 A6NJR5 290 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 ORC4O43929 436 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 PARNO95453 639 aaKnown RBP13.5□□□□□ -0.25
MRPS28-206ENST00000520946 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
MRPS28-206ENST00000520946 DIEXFQ68CQ4 756 aaKnown RBP13.5□□□□□ -0.25
MRPS28-206ENST00000520946 C7orf31Q8N865 590 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 NCOR1O75376 2440 aa13.5□□□□□ -0.25
MRPS28-206ENST00000520946 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
MRPS28-206ENST00000520946 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
MRPS28-206ENST00000520946 GH1P01241 217 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 SELPP16109 830 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 LRRC8DQ7L1W4 858 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 EVI5LQ96CN4 794 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
MRPS28-206ENST00000520946 EFCAB14O75071 495 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 PDHBP11177 359 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-206ENST00000520946 IKBKEQ14164 716 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 DGKDQ16760 1214 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 FAM117BQ6P1L5 589 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 CNKSR3Q6P9H4 555 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
MRPS28-206ENST00000520946 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 NSUN6Q8TEA1 469 aaKnown RBP13.48□□□□□ -0.25
MRPS28-206ENST00000520946 CLEC4DQ8WXI8 215 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 TTC14Q96N46 770 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 TGS1Q96RS0 853 aaKnown RBP13.48□□□□□ -0.25
MRPS28-206ENST00000520946 ALG1Q9BT22 464 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 KATNAL1Q9BW62 490 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 HELLSQ9NRZ9 838 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 TCP11L1Q9NUJ3 509 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
MRPS28-206ENST00000520946 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 WDR19Q8NEZ3 1342 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 ABHD14A-ACY1A0A1B0GW23 586 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 MMP3P08254 477 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
MRPS28-206ENST00000520946 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 STXBP2Q15833 593 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 LY6KQ17RY6 165 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
MRPS28-206ENST00000520946 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 ARHGEF16Q5VV41 709 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 RAD9AQ99638 391 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 RNF41Q9H4P4 317 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-206ENST00000520946 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-206ENST00000520946 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
MRPS28-206ENST00000520946 FGAP02671 866 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 EDNRBP24530 442 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 HAND2P61296 217 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 ALX1Q15699 326 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-206ENST00000520946 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-206ENST00000520946 OTUD7AQ8TE49 926 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-206ENST00000520946 ESR2Q92731 530 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
MRPS28-206ENST00000520946 ABCB11O95342 1321 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 FAM86C2PA6NEL3 165 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 ARIH2O95376 493 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 PCP11498 1178 aaKnown RBP13.45□□□□□ -0.26
MRPS28-206ENST00000520946 CKBP12277 381 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 NOVP48745 357 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 MFAP1P55081 439 aaKnown RBP13.45□□□□□ -0.26
MRPS28-206ENST00000520946 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 IQCA1Q86XH1 822 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 RGS22Q8NE09 1264 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 IWS1Q96ST2 819 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 RMDN3Q96TC7 470 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 UBA5Q9GZZ9 404 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 KAT14Q9H8E8 782 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 MRPL11Q9Y3B7 192 aaKnown RBP13.45□□□□□ -0.26
MRPS28-206ENST00000520946 MRVI1Q9Y6F6 885 aa13.45□□□□□ -0.26
MRPS28-206ENST00000520946 LCHNA4D1U4 455 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms