RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 SLC17A8Q8NDX2 589 aa23.86■■□□□ 1.41
SNHG6-203ENST00000520944 KPNA6O60684 536 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 CSF2RAP15509 400 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 PURAQ00577 322 aaKnown RBP23.85■■□□□ 1.41
SNHG6-203ENST00000520944 TMEM67Q5HYA8 995 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 CATIPQ7Z7H3 387 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 MTG1Q9BT17 334 aaPredicted RBP23.85■■□□□ 1.41
SNHG6-203ENST00000520944 TRPV6Q9H1D0 765 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 HIPK3Q9H422 1215 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 PCDHA1Q9Y5I3 950 aa23.85■■□□□ 1.41
SNHG6-203ENST00000520944 RBM8AQ9Y5S9 174 aaKnown RBP23.85■■□□□ 1.41
SNHG6-203ENST00000520944 CYP2C18P33260 490 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 GRM4Q14833 912 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 SEPT14Q6ZU15 432 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 HOMER1Q86YM7 354 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 COPS5Q92905 334 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 MTMR8Q96EF0 704 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.84■■□□□ 1.416e-12■□□□□ 9.7
SNHG6-203ENST00000520944 MAP3K20Q9NYL2 800 aaKnown RBP23.84■■□□□ 1.41
SNHG6-203ENST00000520944 COL20A1Q9P218 1284 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 TAF6LQ9Y6J9 622 aa23.84■■□□□ 1.41
SNHG6-203ENST00000520944 LCTP09848 1927 aa23.83■■□□□ 1.41
SNHG6-203ENST00000520944 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.83■■□□□ 1.41
SNHG6-203ENST00000520944 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.83■■□□□ 1.41
SNHG6-203ENST00000520944 A6NJR5 290 aa23.83■■□□□ 1.41
SNHG6-203ENST00000520944 B4GALT4O60513 344 aa23.83■■□□□ 1.41
SNHG6-203ENST00000520944 SUPT20HL2P0C7V6 817 aa23.83■■□□□ 1.41
SNHG6-203ENST00000520944 ALDH8A1Q9H2A2 487 aaPredicted RBP23.83■■□□□ 1.41
SNHG6-203ENST00000520944 LRRC37A2A6NM11 1700 aa23.83■■□□□ 1.41
SNHG6-203ENST00000520944 EIF3JO75822 258 aaKnown RBP23.82■■□□□ 1.4
SNHG6-203ENST00000520944 EIF2AK2P19525 551 aaKnown RBP23.82■■□□□ 1.4
SNHG6-203ENST00000520944 PSRC1Q6PGN9 363 aaPredicted RBP23.82■■□□□ 1.4
SNHG6-203ENST00000520944 STOX1Q6ZVD7 989 aa23.82■■□□□ 1.4
SNHG6-203ENST00000520944 SAMD3Q8N6K7 520 aa23.82■■□□□ 1.4
SNHG6-203ENST00000520944 SEMA6BQ9H3T3 888 aa23.82■■□□□ 1.4
SNHG6-203ENST00000520944 SENP2Q9HC62 589 aa23.82■■□□□ 1.4
SNHG6-203ENST00000520944 ARIH2O95376 493 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 ACRP10323 421 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 HSD17B4P51659 736 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 TROAPQ12815 778 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 FAM47CQ5HY64 1035 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 TMEM240Q5SV17 173 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 CCDC62Q6P9F0 684 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 CASC1Q6TDU7 716 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 C16orf59Q7L2K0 433 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 IGDCC4Q8TDY8 1250 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 GUCD1Q96NT3 240 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 PIGSQ96S52 555 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 RIOX1Q9H6W3 641 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 IL23AQ9NPF7 189 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 PXMP2Q9NR77 195 aa23.81■■□□□ 1.4
SNHG6-203ENST00000520944 PNMA6FA0A0J9YX94 578 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 PPP1R11O60927 126 aaPredicted RBP23.8■■□□□ 1.4
SNHG6-203ENST00000520944 GH1P01241 217 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 NR3C2P08235 984 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 CCL23P55773 120 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 LY6KQ17RY6 165 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 NBPF20Q3BBV1 942 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 ZNF365Q70YC5 407 aa23.8■■□□□ 1.4
SNHG6-203ENST00000520944 MB21D2Q8IYB1 491 aaPredicted RBP23.8■■□□□ 1.4
SNHG6-203ENST00000520944 NOC4LQ9BVI4 516 aaKnown RBP23.8■■□□□ 1.4
SNHG6-203ENST00000520944 ANTXR2P58335 489 aa23.79■■□□□ 1.4
SNHG6-203ENST00000520944 GHRHRQ02643 423 aa23.79■■□□□ 1.4
SNHG6-203ENST00000520944 NFRKBQ6P4R8 1299 aa23.79■■□□□ 1.4
SNHG6-203ENST00000520944 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
SNHG6-203ENST00000520944 ESYT1Q9BSJ8 1104 aa23.79■■□□□ 1.4
SNHG6-203ENST00000520944 TRMT13Q9NUP7 481 aaKnown RBP23.79■■□□□ 1.4
SNHG6-203ENST00000520944 GCOM1H8Y6P7 765 aaPredicted RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 OPLAHO14841 1288 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 FGBP02675 491 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 POLR2MP0CAP2 368 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 KIF5BP33176 963 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 MCM5P33992 734 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 CHMP4BP1P59074 171 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 NFXL1Q6ZNB6 911 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 RPUSD2Q8IZ73 545 aaKnown RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 TMTC2Q8N394 836 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 CTCFLQ8NI51 663 aaPredicted RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 AFG1LQ8WV93 481 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 MTA3Q9BTC8 594 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 LSG1Q9H089 658 aaKnown RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 MTIF3Q9H2K0 278 aaKnown RBP23.78■■□□□ 1.4
SNHG6-203ENST00000520944 MRVI1Q9Y6F6 885 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 UMODL1Q5DID0 1318 aa23.78■■□□□ 1.4
SNHG6-203ENST00000520944 TMEM265A0A087WTH1 108 aa23.77■■□□□ 1.4
SNHG6-203ENST00000520944 PRC1O43663 620 aa23.77■■□□□ 1.4
SNHG6-203ENST00000520944 MYCLP12524 364 aaPredicted RBP23.77■■□□□ 1.4
SNHG6-203ENST00000520944 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
SNHG6-203ENST00000520944 CDX2Q99626 313 aaPredicted RBP23.77■■□□□ 1.4
SNHG6-203ENST00000520944 LY9Q9HBG7 655 aa23.77■■□□□ 1.4
SNHG6-203ENST00000520944 ANO2Q9NQ90 1003 aa23.77■■□□□ 1.4
SNHG6-203ENST00000520944 CYTH3O43739 400 aa23.76■■□□□ 1.39
SNHG6-203ENST00000520944 CYP2C9P11712 490 aa23.76■■□□□ 1.39
SNHG6-203ENST00000520944 CASTP20810 708 aaKnown RBP23.76■■□□□ 1.39
SNHG6-203ENST00000520944 PTPN11Q06124 597 aaPredicted RBP23.76■■□□□ 1.39
SNHG6-203ENST00000520944 SLC35G1Q2M3R5 365 aa23.76■■□□□ 1.39
SNHG6-203ENST00000520944 ZNF654Q8IZM8 581 aa23.76■■□□□ 1.39
SNHG6-203ENST00000520944 PIBF1Q8WXW3 757 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms