RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 VAMP4O75379 141 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 CYBBP04839 570 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 NAT2P11245 290 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 TACR1P25103 407 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 ZNF200P98182 395 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 EFEMP1Q12805 493 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 NR1I3Q14994 352 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 EEF1DP3Q658K8 133 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 PAQR3Q6TCH7 311 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 LRP10Q7Z4F1 713 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 ARHGEF39Q8N4T4 335 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 NLGN2Q8NFZ4 835 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 APBA2Q99767 749 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 ZSWIM4Q9H7M6 989 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 PDLIM7Q9NR12 457 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 APEX2Q9UBZ4 518 aa4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 CDK11AQ9UQ88 783 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC13-212ENST00000520525 A0A1W2PQ27 194 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 A0A1W2PQ64 194 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 A0A1W2PQC6 194 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 A0A1W2PQD8 194 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 BUB1BO60566 1050 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 TBC1D8O95759 1140 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 GLI4P10075 376 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 L1CAMP32004 1257 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 RASGRF1Q13972 1273 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 BMS1Q14692 1282 aaKnown RBP4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 NFE2L2Q16236 605 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 VMACQ2NL98 169 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 DPY19L1Q2PZI1 675 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 SLC10A6Q3KNW5 377 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 BICRALQ6AI39 1079 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 CNKSR3Q6P9H4 555 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 ADAT2Q7Z6V5 191 aaKnown RBP4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 SYT8Q8NBV8 401 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 ST13P5Q8NFI4 369 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 RCC1LQ96I51 464 aaKnown RBP4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 TEPSINQ96N21 525 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 EPN3Q9H201 632 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 PIF1Q9H611 641 aa4.86□□□□□ -1.63
TRAPPC13-212ENST00000520525 PPP1R11O60927 126 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 PPM1BO75688 479 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 LIMS1P48059 325 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 GRB10Q13322 594 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 SPATS1Q496A3 300 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 SV2CQ496J9 727 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 ZNF669Q96BR6 464 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 ADAM7Q9H2U9 754 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 SUGT1Q9Y2Z0 365 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 BACE2Q9Y5Z0 518 aa4.85□□□□□ -1.63
TRAPPC13-212ENST00000520525 C2orf71A6NGG8 1288 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 INSRRP14616 1297 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 ATF2P15336 505 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 PRR5P85299 388 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 AMPD2Q01433 879 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 SPATC1Q76KD6 591 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 TP53I13Q8NBR0 393 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 PPP1R14AQ96A00 147 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 MRFAP1L1Q96HT8 127 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 PWWP2AQ96N64 755 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 RXFP1Q9HBX9 757 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 EMC9Q9Y3B6 208 aa4.84□□□□□ -1.63
TRAPPC13-212ENST00000520525 ZC3H12DA2A288 527 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 F8W031 263 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 NOP56O00567 594 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 ITGAVP06756 1048 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 SEPHS1P49903 392 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 PLP2Q04941 152 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 IFRD2Q12894 506 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 MTERF2Q49AM1 385 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 MBLAC2Q68D91 279 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 ZNF227Q86WZ6 799 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 SP8Q8IXZ3 490 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 BVESQ8NE79 360 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 COPS5Q92905 334 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 MRGPRX3Q96LB0 322 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 DNAJC7Q99615 494 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 MTA3Q9BTC8 594 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 LGR4Q9BXB1 951 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 LUC7LQ9NQ29 371 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 PFDN2Q9UHV9 154 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 AKT3Q9Y243 479 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 RWDD3Q9Y3V2 267 aa4.83□□□□□ -1.64
TRAPPC13-212ENST00000520525 A0A1W2PQJ5 194 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 IQCA1LA6NCM1 817 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 AGRPO00253 132 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 FFAR3O14843 346 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 TBX1O43435 398 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 DIAPH1O60610 1272 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 PLA2G1BP04054 148 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 PFKLP17858 780 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 MC3RP41968 323 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 CYP4F3Q08477 520 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 PUM1Q14671 1186 aaKnown RBP eCLIP4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 VWA3BQ502W6 1294 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms