RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.48■■■□□ 2.311e-12■■■□□ 14.9
VEGFA-220ENST00000519767 MTG1Q9BT17 334 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-220ENST00000519767 PPP1R12CQ9BZL4 782 aa29.48■■■□□ 2.31
VEGFA-220ENST00000519767 TRPV6Q9H1D0 765 aa29.48■■■□□ 2.31
VEGFA-220ENST00000519767 HIPK3Q9H422 1215 aa29.48■■■□□ 2.31
VEGFA-220ENST00000519767 MAD2L2Q9UI95 211 aa29.48■■■□□ 2.31
VEGFA-220ENST00000519767 TMEM265A0A087WTH1 108 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 MYL3P08590 195 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 PSMC6P62333 389 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 STXBP2Q15833 593 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 C16orf59Q7L2K0 433 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 SAMD3Q8N6K7 520 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 MTMR8Q96EF0 704 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 FAM161BQ96MY7 647 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 LCTP09848 1927 aa29.47■■■□□ 2.31
VEGFA-220ENST00000519767 E7EWF7 191 aa29.46■■■□□ 2.31
VEGFA-220ENST00000519767 ZBTB5O15062 677 aa29.46■■■□□ 2.31
VEGFA-220ENST00000519767 CYP2C18P33260 490 aa29.46■■■□□ 2.31
VEGFA-220ENST00000519767 TMEM240Q5SV17 173 aa29.46■■■□□ 2.31
VEGFA-220ENST00000519767 PSRC1Q6PGN9 363 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-220ENST00000519767 ALDH8A1Q9H2A2 487 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-220ENST00000519767 LRRC37A2A6NM11 1700 aa29.45■■■□□ 2.31
VEGFA-220ENST00000519767 B4GALT4O60513 344 aa29.45■■■□□ 2.31
VEGFA-220ENST00000519767 ARHGEF16Q5VV41 709 aa29.45■■■□□ 2.31
VEGFA-220ENST00000519767 IL23AQ9NPF7 189 aa29.45■■■□□ 2.31
VEGFA-220ENST00000519767 EIF3JO75822 258 aaKnown RBP29.44■■■□□ 2.3
VEGFA-220ENST00000519767 GRM4Q14833 912 aa29.44■■■□□ 2.3
VEGFA-220ENST00000519767 WTAPQ15007 396 aa29.44■■■□□ 2.3
VEGFA-220ENST00000519767 CCDC62Q6P9F0 684 aa29.44■■■□□ 2.3
VEGFA-220ENST00000519767 NOC4LQ9BVI4 516 aaKnown RBP29.44■■■□□ 2.3
VEGFA-220ENST00000519767 COL20A1Q9P218 1284 aa29.44■■■□□ 2.3
VEGFA-220ENST00000519767 PCDHA1Q9Y5I3 950 aa29.44■■■□□ 2.3
VEGFA-220ENST00000519767 CFBP00751 764 aa29.43■■■□□ 2.3
VEGFA-220ENST00000519767 GHRHRQ02643 423 aa29.43■■■□□ 2.3
VEGFA-220ENST00000519767 RASIP1Q5U651 963 aa29.43■■■□□ 2.3
VEGFA-220ENST00000519767 ZNF365Q70YC5 407 aa29.43■■■□□ 2.3
VEGFA-220ENST00000519767 CDX2Q99626 313 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-220ENST00000519767 FGBP02675 491 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 HSD17B4P51659 736 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 NFRKBQ6P4R8 1299 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 SEPT14Q6ZU15 432 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 RPUSD2Q8IZ73 545 aaKnown RBP29.42■■■□□ 2.3
VEGFA-220ENST00000519767 COPS5Q92905 334 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 RIOX1Q9H6W3 641 aa29.42■■■□□ 2.3
VEGFA-220ENST00000519767 GH1P01241 217 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 NR3C2P08235 984 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 ACRP10323 421 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 PTPN11Q06124 597 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-220ENST00000519767 TROAPQ12815 778 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 NBPF20Q3BBV1 942 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 CATIPQ7Z7H3 387 aa29.41■■■□□ 2.3
VEGFA-220ENST00000519767 MTIF3Q9H2K0 278 aaKnown RBP29.41■■■□□ 2.3
VEGFA-220ENST00000519767 TTYH1Q9H313 450 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-220ENST00000519767 ARIH2O95376 493 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 TMEM67Q5HYA8 995 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 IGDCC4Q8TDY8 1250 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 HERVK_113Q902F9 699 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 MTA3Q9BTC8 594 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 PXMP2Q9NR77 195 aa29.4■■■□□ 2.3
VEGFA-220ENST00000519767 RBM8AQ9Y5S9 174 aaKnown RBP29.4■■■□□ 2.3
VEGFA-220ENST00000519767 PPP1R11O60927 126 aaPredicted RBP29.39■■■□□ 2.3
VEGFA-220ENST00000519767 STOX1Q6ZVD7 989 aa29.39■■■□□ 2.3
VEGFA-220ENST00000519767 TRMT13Q9NUP7 481 aaKnown RBP29.39■■■□□ 2.3
VEGFA-220ENST00000519767 TAF6LQ9Y6J9 622 aa29.39■■■□□ 2.3
VEGFA-220ENST00000519767 PNMA6FA0A0J9YX94 578 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 OPLAHO14841 1288 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 EIF2AK2P19525 551 aaKnown RBP29.38■■■□□ 2.29
VEGFA-220ENST00000519767 CCL23P55773 120 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 LY6KQ17RY6 165 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 PIGSQ96S52 555 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 MAP3K14Q99558 947 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 UMODL1Q5DID0 1318 aa29.38■■■□□ 2.29
VEGFA-220ENST00000519767 DNAJB2P25686 324 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 FAM47CQ5HY64 1035 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 KCNV1Q6PIU1 500 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 CHST3Q7LGC8 479 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 HOMER1Q86YM7 354 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 MB21D2Q8IYB1 491 aaPredicted RBP29.37■■■□□ 2.29
VEGFA-220ENST00000519767 TMTC2Q8N394 836 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 AFG1LQ8WV93 481 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 SENP2Q9HC62 589 aa29.37■■■□□ 2.29
VEGFA-220ENST00000519767 DDX41Q9UJV9 622 aaKnown RBP29.37■■■□□ 2.29
VEGFA-220ENST00000519767 GCOM1H8Y6P7 765 aaPredicted RBP29.36■■■□□ 2.29
VEGFA-220ENST00000519767 POLR2MP0CAP2 368 aa29.36■■■□□ 2.29
VEGFA-220ENST00000519767 ARHGAP1Q07960 439 aa29.36■■■□□ 2.29
VEGFA-220ENST00000519767 WNT8AQ9H1J5 351 aa29.36■■■□□ 2.29
VEGFA-220ENST00000519767 CASTP20810 708 aaKnown RBP29.35■■■□□ 2.29
VEGFA-220ENST00000519767 ANTXR2P58335 489 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 LAMC2Q13753 1193 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 SLC35G1Q2M3R5 365 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 CASC1Q6TDU7 716 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 VSIG10LQ86VR7 867 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 EMID1Q96A84 441 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-220ENST00000519767 TIFAQ96CG3 184 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 PDCD2LQ9BRP1 358 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 CUL9Q8IWT3 2517 aa29.35■■■□□ 2.29
VEGFA-220ENST00000519767 CYTH3O43739 400 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 PFKMP08237 780 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 MMP3P08254 477 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 CYP2C9P11712 490 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms