RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RARBP10826 455 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 CALML3P27482 149 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 FGD1P98174 961 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 PKN1Q16512 942 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 DUSP28Q4G0W2 176 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 CCDC62Q6P9F0 684 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 VSIG10LQ86VR7 867 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 MYH6P13533 1939 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 STXBP3O00186 592 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 LRRC41Q15345 812 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 SCFD2Q8WU76 684 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 ZMYND12Q9H0C1 365 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 RIC8AQ9NPQ8 531 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-212ENST00000519661 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 SYNRGQ9UMZ2 1314 aa13.29□□□□□ -0.28
SPIDR-212ENST00000519661 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 RGS20O76081 388 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 CFBP00751 764 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-212ENST00000519661 NR3C2P08235 984 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 TGFB3P10600 412 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 HOXD8P13378 290 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-212ENST00000519661 SCG2P13521 617 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 ICAM3P32942 547 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 STXBP2Q15833 593 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 MCTP2Q6DN12 878 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
SPIDR-212ENST00000519661 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 SH3GLB2Q9NR46 395 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 ZHX1Q9UKY1 873 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-212ENST00000519661 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 MCM3APO60318 1980 aa13.28□□□□□ -0.28
SPIDR-212ENST00000519661 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-212ENST00000519661 SMPD1P17405 629 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 CNGA1P29973 690 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 AK2P54819 239 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 TNFAIP2Q03169 654 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 PDE4DQ08499 809 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 PGM5Q15124 567 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 RNF180Q86T96 592 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 RAB11FIP4Q86YS3 637 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 FBXO16Q8IX29 292 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-212ENST00000519661 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.29
SPIDR-212ENST00000519661 HTATIP2Q9BUP3 242 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 C11orf49Q9H6J7 331 aa13.27□□□□□ -0.29
SPIDR-212ENST00000519661 A6NJR5 290 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 ELP1O95163 1332 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-212ENST00000519661 ADCYAP1R1P41586 468 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 SCRN1Q12765 414 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-212ENST00000519661 CUL5Q93034 780 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 TBC1D32Q96NH3 1257 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
SPIDR-212ENST00000519661 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 CDKL5O76039 1030 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 DEXIO95424 95 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 NEK4P51957 841 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 MRPS9P82933 396 aaKnown RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 PCSK9Q8NBP7 692 aaKnown RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 DAGLBQ8NCG7 672 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 SENP7Q9BQF6 1050 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 BACH2Q9BYV9 841 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
SPIDR-212ENST00000519661 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
SPIDR-212ENST00000519661 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 KBTBD13C9JR72 458 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 MAFGO15525 162 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms