RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, human

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE2-205	ENST00000519535	PXMP2	Q9NR77	195 aa		15.74	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TBX21	Q9UL17	535 aa		15.74	■□□□□ 0.11
SCUBE2-205	ENST00000519535	MRPL11	Q9Y3B7	192 aa	Known RBP	15.74	■□□□□ 0.11
SCUBE2-205	ENST00000519535	ERICH2	A1L162	156 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	KIAA0355	O15063	1070 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	LIFR	P42702	1097 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TSGA10IP	Q3SY00	556 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TMEM87B	Q96K49	555 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	NEK1	Q96PY6	1258 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	FAM217B	Q9NTX9	383 aa	Predicted RBP	15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	PNMA2	Q9UL42	364 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TELO2	Q9Y4R8	837 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SNX14	Q9Y5W7	946 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	LTBP2	Q14767	1821 aa		15.73	■□□□□ 0.11
SCUBE2-205	ENST00000519535	PNMA6F	A0A0J9YX94	578 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	ARVCF	O00192	962 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	CLTB	P09497	229 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	FUT2	Q10981	343 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SART3	Q15020	963 aa	Known RBP	15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	LY6K	Q17RY6	165 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	CASC1	Q6TDU7	716 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SEPT14	Q6ZU15	432 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SGMS1	Q86VZ5	419 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	FAM126B	Q8IXS8	530 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TDH	Q8IZJ6	230 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	VWCE	Q96DN2	955 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	PDCD2L	Q9BRP1	358 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TRPV6	Q9H1D0	765 aa		15.72	■□□□□ 0.11
SCUBE2-205	ENST00000519535	ELP1	O95163	1332 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	UMODL1	Q5DID0	1318 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	LOC102724159	A0A0B4J2E5	919 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	ADAMTS3	O15072	1205 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SORBS3	O60504	671 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	CD4	P01730	458 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	NR3C2	P08235	984 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	HSPA4	P34932	840 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SP2	Q02086	613 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	ARHGAP1	Q07960	439 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	PWP2	Q15269	919 aa	Known RBP	15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SHH	Q15465	462 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TYW1B	Q6NUM6	668 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	NFXL1	Q6ZNB6	911 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TMTC3	Q6ZXV5	915 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	C16orf59	Q7L2K0	433 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	MICU3	Q86XE3	530 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	MCF2L2	Q86YR7	1114 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	CCDC82	Q8N4S0	544 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	PCSK9	Q8NBP7	692 aa	Known RBP	15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	OR6J1	Q8NGC5	347 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	NSUN6	Q8TEA1	469 aa	Known RBP	15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	GLT1D1	Q96MS3	346 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	TOX2	Q96NM4	488 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	MAP3K14	Q99558	947 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	MTA3	Q9BTC8	594 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	SPZ1	Q9BXG8	430 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	AP5M1	Q9H0R1	490 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535		Q9Y3F1	56 aa		15.71	■□□□□ 0.11
SCUBE2-205	ENST00000519535	EYS	Q5T1H1	3165 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535		A0A1W2PPC1	479 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	TXN	P10599	105 aa	Known RBP	15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CDC27	P30260	824 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	PURA	Q00577	322 aa	Known RBP	15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	APOA5	Q6Q788	366 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	USP17L6P	Q6QN14	398 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	DHX32	Q7L7V1	743 aa	Known RBP	15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	FCHSD1	Q86WN1	690 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	SCFD2	Q8WU76	684 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	VTI1A	Q96AJ9	217 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	SPC25	Q9HBM1	224 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	TMEM39A	Q9NV64	488 aa		15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535	DDX41	Q9UJV9	622 aa	Known RBP	15.7	■□□□□ 0.1
SCUBE2-205	ENST00000519535		A0A0U1RQG5	324 aa	Predicted RBP	15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CCDC69	A6NI79	296 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535		A6NJR5	290 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	MEIS2	O14770	477 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	MYL3	P08590	195 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	MYCL	P12524	364 aa	Predicted RBP	15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	MRPS9	P82933	396 aa	Known RBP	15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	SEMA3F	Q13275	785 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	ITGA7	Q13683	1181 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	PGM5	Q15124	567 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	PPP2R5B	Q15173	497 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	ARHGEF16	Q5VV41	709 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535		Q7L0L9	218 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	VSIG10L	Q86VR7	867 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	FANCB	Q8NB91	859 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CTCFL	Q8NI51	663 aa	Predicted RBP	15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	AFG1L	Q8WV93	481 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	KAT2B	Q92831	832 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	TRMT13	Q9NUP7	481 aa	Known RBP	15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	SLC12A7	Q9Y666	1083 aa		15.69	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CNTNAP5	Q8WYK1	1306 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	GCOM1	H8Y6P7	765 aa	Predicted RBP	15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	B4GALT4	O60513	344 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	POLR2M	P0CAP2	368 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CYP2C18	P33260	490 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	JAKMIP1	Q96N16	626 aa	Known RBP	15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	CTAGE1	Q96RT6	745 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	IWS1	Q96ST2	819 aa		15.68	■□□□□ 0.1
SCUBE2-205	ENST00000519535	LBHD1	Q9BQE6	289 aa	Predicted RBP	15.68	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms