RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 SIT1Q9Y3P8 196 aa4.94□□□□□ -1.62
PCM1-208ENST00000518877 A0A087WZG4 1122 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 AURKAO14965 403 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 VAMP4O75379 141 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 C8BP07358 591 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 GUCY2CP25092 1073 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 THBS2P35442 1172 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 FAM26FQ5R3K3 315 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 CD300LDQ6UXZ3 194 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 ETV3LQ6ZN32 361 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 ZFPM1Q8IX07 1006 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 KYQ8NBH2 561 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 GIPC2Q8TF65 315 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 MTA3Q9BTC8 594 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 MCMBPQ9BTE3 642 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 BCL11AQ9H165 835 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 PCDH18Q9HCL0 1135 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 WHRNQ9P202 907 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 BACE2Q9Y5Z0 518 aa4.93□□□□□ -1.62
PCM1-208ENST00000518877 NPHS1O60500 1241 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 FUCA1P04066 466 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 NTRK1P04629 796 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 PAMP19021 973 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 ZNF326Q5BKZ1 582 aaKnown RBP4.92□□□□□ -1.62
PCM1-208ENST00000518877 RUFY4Q6ZNE9 571 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 USP51Q70EK9 711 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 ADAT2Q7Z6V5 191 aaKnown RBP4.92□□□□□ -1.62
PCM1-208ENST00000518877 STK32CQ86UX6 486 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 SYT3Q9BQG1 590 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 MENTQ9BUN1 341 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 GBP3Q9H0R5 595 aa4.92□□□□□ -1.62
PCM1-208ENST00000518877 ZNF214Q9UL59 606 aaPredicted RBP4.92□□□□□ -1.62
PCM1-208ENST00000518877 NPHP3-ACAD11A0A0J9YXS1 232 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 C2orf71A6NGG8 1288 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 CYR61O00622 381 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 CBFA2T2O43439 604 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 PPP1R11O60927 126 aaPredicted RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 SLPIP03973 132 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 AMPD2Q01433 879 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 HEATR6Q6AI08 1181 aaKnown RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 ZC3H18Q86VM9 953 aaKnown RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 DCP2Q8IU60 420 aaKnown RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 TXNDC5Q8NBS9 432 aaKnown RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 CDK5RAP1Q96SZ6 601 aaKnown RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 HAUS7Q99871 368 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 SSBP3Q9BWW4 388 aaPredicted RBP4.91□□□□□ -1.62
PCM1-208ENST00000518877 AP5M1Q9H0R1 490 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
PCM1-208ENST00000518877 TSC22D4Q9Y3Q8 395 aa4.91□□□□□ -1.62
PCM1-208ENST00000518877 TRBV23OR9-2A0A075B6M9 112 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
PCM1-208ENST00000518877 LAMTOR5O43504 91 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 SURF1Q15526 300 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 GNPTABQ3T906 1256 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 C9orf131Q5VYM1 1079 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 Q8N1X5 172 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 FAM26EQ8N5C1 309 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 TTLL6Q8N841 843 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 LCORQ96JN0 433 aaPredicted RBP4.9□□□□□ -1.63
PCM1-208ENST00000518877 FGD4Q96M96 766 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 PPT2Q9UMR5 302 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 SUGT1Q9Y2Z0 365 aa4.9□□□□□ -1.63
PCM1-208ENST00000518877 C7orf72A4D263 438 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 FZD7O75084 574 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 PPM1BO75688 479 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 CYP1A1P04798 512 aaPredicted RBP4.89□□□□□ -1.63
PCM1-208ENST00000518877 RBM10P98175 930 aaKnown RBP4.89□□□□□ -1.63
PCM1-208ENST00000518877 PRAMEF18Q5VWM3 479 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 CRIP3Q6Q6R5 217 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 PLEKHH3Q7Z736 793 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 PALM2Q8IXS6 379 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 TMEM87AQ8NBN3 555 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 VPS11Q9H270 941 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 DEF6Q9H4E7 631 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 BTG4Q9NY30 223 aa4.89□□□□□ -1.63
PCM1-208ENST00000518877 ACVRL1P37023 503 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 ITGA1P56199 1179 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 ICAM4Q14773 271 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 ZNF585AQ6P3V2 769 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 RBBP8NLQ8NC74 664 aaPredicted RBP4.88□□□□□ -1.63
PCM1-208ENST00000518877 KLC2Q9H0B6 622 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 JADE2Q9NQC1 790 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 CGGBP1Q9UFW8 167 aaPredicted RBP4.88□□□□□ -1.63
PCM1-208ENST00000518877 SLC12A7Q9Y666 1083 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 LTBP3Q9NS15 1303 aa4.88□□□□□ -1.63
PCM1-208ENST00000518877 SGSM2O43147 1006 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 B4GALT3O60512 393 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 AMHP03971 560 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 EPHX1P07099 455 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 SLC7A5Q01650 507 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 CDSNQ15517 529 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 CRB2Q5IJ48 1285 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 CIR1Q86X95 450 aaPredicted RBP4.87□□□□□ -1.63
PCM1-208ENST00000518877 SEC14L1Q92503 715 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 CRBNQ96SW2 442 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 YIPF4Q9BSR8 244 aa4.87□□□□□ -1.63
PCM1-208ENST00000518877 ZNF747Q9BV97 191 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms