RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NAT10Q9H0A0 1025 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 CUEDC2Q9H467 287 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 KCNH4Q9UQ05 1017 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 A0A0G2JLL6 359 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 SLC37A4O43826 429 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 SMC2O95347 1197 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 ALAS1P13196 640 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 HOXA13P31271 388 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 TXKP42681 527 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 POSTNQ15063 836 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 ANO6Q4KMQ2 910 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 LDLRAD1Q5T700 205 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 PRRT2Q7Z6L0 340 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 STK24Q9Y6E0 443 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 A0A0G2JMZ2 1700 aa17.01■□□□□ 0.31
TRAPPC9-205ENST00000518839 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-205ENST00000518839 ZNF76P36508 570 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 TECP42680 631 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 NLRP12P59046 1061 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
TRAPPC9-205ENST00000518839 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 FASTKD5Q7L8L6 764 aaKnown RBP17■□□□□ 0.31
TRAPPC9-205ENST00000518839 CABP7Q86V35 215 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 MB21D1Q8N884 522 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 TRIML1Q8N9V2 468 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 REPS2Q8NFH8 660 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 OTUD5Q96G74 571 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 CALML4Q96GE6 196 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 FAM20AQ96MK3 541 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 PANK2Q9BZ23 570 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 KCNMB3Q9NPA1 279 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 DISC1Q9NRI5 854 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 LRWD1Q9UFC0 647 aa17■□□□□ 0.31
TRAPPC9-205ENST00000518839 TAL1P17542 331 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 STAT6P42226 847 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 E2F4Q16254 413 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 SH3RF1Q7Z6J0 888 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 RNF214Q8ND24 703 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 SMARCE1Q969G3 411 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 PCDHA12Q9UN75 941 aa16.99■□□□□ 0.31
TRAPPC9-205ENST00000518839 A0A087X0B3 334 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 IRF6O14896 467 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 MYL1P05976 194 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 ZNF165P49910 485 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 PNOCQ13519 176 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 KRT79Q5XKE5 535 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 OPTNQ96CV9 577 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 CLMNQ96JQ2 1002 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
TRAPPC9-205ENST00000518839 RPTORQ8N122 1335 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 KDM3AQ9Y4C1 1321 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 NFIBO00712 420 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 SETQ01105 290 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 SEMA3FQ13275 785 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 KARSQ15046 597 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 PRR16Q569H4 304 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 SNRNP48Q6IEG0 339 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 LBX2Q6XYB7 198 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 MOB2Q70IA6 237 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 HAS1Q92839 578 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 SLC10A4Q96EP9 437 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 BPIFA3Q9BQP9 254 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 DNAJC25Q9H1X3 360 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 ZNF214Q9UL59 606 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 AGTPBP1Q9UPW5 1226 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 PCDHA5Q9Y5H7 936 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 TRPM7Q96QT4 1865 aa16.97■□□□□ 0.31
TRAPPC9-205ENST00000518839 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 GTPBP6O43824 516 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 SARSP49591 514 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 SNAPC2Q13487 334 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 TMEM132BQ14DG7 1078 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 RNF207Q6ZRF8 634 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 NIPA1Q7RTP0 329 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 CHST13Q8NET6 341 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms