RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
VEGFA-219ENST00000518824 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
VEGFA-219ENST00000518824 PRO3102Q9H379 93 aa15.41■□□□□ 0.06
VEGFA-219ENST00000518824 PXMP2Q9NR77 195 aa15.41■□□□□ 0.06
VEGFA-219ENST00000518824 RBM27Q9P2N5 1060 aaKnown RBP15.41■□□□□ 0.06
VEGFA-219ENST00000518824 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
VEGFA-219ENST00000518824 ZBTB43O43298 467 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 SEC24BO95487 1268 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 CALM1P0DP23 149 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 CALM2P0DP24 149 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 CALM3P0DP25 149 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 GNAQP50148 359 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 NKX3-2P78367 333 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 USP17L6PQ6QN14 398 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 SEPT14Q6ZU15 432 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 NSUN6Q8TEA1 469 aaKnown RBP15.4■□□□□ 0.06
VEGFA-219ENST00000518824 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.069e-7■□□□□ 11
VEGFA-219ENST00000518824 BRF1Q92994 677 aa15.4■□□□□ 0.06
VEGFA-219ENST00000518824 TSEN34Q9BSV6 310 aaKnown RBP15.4■□□□□ 0.06
VEGFA-219ENST00000518824 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-219ENST00000518824 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 PPFIA3O75145 1194 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 NR3C2P08235 984 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 ADD1P35611 737 aaKnown RBP15.39■□□□□ 0.05
VEGFA-219ENST00000518824 TLE2Q04725 743 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
VEGFA-219ENST00000518824 RTN1Q16799 776 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 TYW1BQ6NUM6 668 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 PPP1R13LQ8WUF5 828 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 PDCD2LQ9BRP1 358 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 AGXT2Q9BYV1 514 aa15.39■□□□□ 0.05
VEGFA-219ENST00000518824 UPF3BQ9BZI7 483 aaKnown RBP15.39■□□□□ 0.05
VEGFA-219ENST00000518824 LTBP2Q14767 1821 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 GCOM1H8Y6P7 765 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 MEIS2O14770 477 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 RGS20O76081 388 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 HMGB1P09429 215 aaKnown RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 POLR2MP0CAP2 368 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 ITGB8P26012 769 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 MAGEA10P43363 369 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 LY6KQ17RY6 165 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 HABP4Q5JVS0 413 aaKnown RBP15.38■□□□□ 0.05
VEGFA-219ENST00000518824 CCDC62Q6P9F0 684 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 SYNE3Q6ZMZ3 975 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 GDF15Q99988 308 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 ZSWIM6Q9HCJ5 1215 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 STARD7Q9NQZ5 370 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 GRIN2DO15399 1336 aa15.38■□□□□ 0.05
VEGFA-219ENST00000518824 TRIM43BA6NCK2 446 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 PQBP1O60828 265 aaKnown RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 PSMC6P62333 389 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 FGD1P98174 961 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 MDM2Q00987 491 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 PGM5Q15124 567 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 UBE2SQ16763 222 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 WWC2Q6AWC2 1192 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 RUFY3Q7L099 469 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 OR6J1Q8NGC5 347 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 TRIM43Q96BQ3 446 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 IWS1Q96ST2 819 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 MAF1Q9H063 256 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 AP5M1Q9H0R1 490 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 PDLIM7Q9NR12 457 aa15.37■□□□□ 0.05
VEGFA-219ENST00000518824 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 V9GY48 417 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-219ENST00000518824 RBAK-RBAKDNI3L0D1 243 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 ADAMTS3O15072 1205 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 SORBS3O60504 671 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 DTNBO60941 627 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 CDK7P50613 346 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 MRPS9P82933 396 aaKnown RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 STXBP2Q15833 593 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 C1orf53Q5VUE5 145 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 HEATR3Q7Z4Q2 680 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 VSIG10LQ86VR7 867 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 PCSK9Q8NBP7 692 aaKnown RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 SCFD2Q8WU76 684 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 BCAS3Q9H6U6 928 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 NCOA5Q9HCD5 579 aaKnown RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 PRDM5Q9NQX1 630 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
VEGFA-219ENST00000518824 Q9Y3F1 56 aa15.36■□□□□ 0.05
VEGFA-219ENST00000518824 MYH7BA7E2Y1 1941 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms